ylqD

168

unknown

Locus: BSU_16010

Molecular weight: 14.90 kDa

Isoelectric point: 8.13

Protein length: 128 aa

Gene length: 387 bp

Function: unknown

Product: unknown

Essential: no

E.C.: null

Synonyms: ylqD

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms

Gene

Coordinates: 1,674,259  1,674,645

The protein

Structure

• O31739 (AlphaFold)

Expression and Regulation

Operons

• Genes: ylxM-ffh-rpsP-khpA-ylqD-rimM-trmD-rplS

  Description: PubMed

  Regulation

  • the mRNA is processed between ffh and rpsP by RNase Y, this requires the RicA-RicF-RicT complex PubMed

  Expression

  • expression is decreased upon depletion of tRNA maturation factors rnpB or rnz PubMed

  Sigma factors

  • SigA: sigma factor, PubMed, in sigA regulon

• Genes: rpsP-khpA-ylqD-rimM-trmD-rplS

  Description: PubMed

• Genes: rpsP-khpA-ylqD-rimM

  Description: PubMed

Biological materials

Mutant

• MGNA-B174 (ylqD::erm), available at the NBRP B. subtilis, Japan
• BKE16010 (ylqD::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCGCACCAAGCTCCCCGC,  downstream forward: _UP4_ATTGAAATTCGCCAGAGGTG
• BKK16010 (ylqD::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCGCACCAAGCTCCCCGC,  downstream forward: _UP4_ATTGAAATTCGCCAGAGGTG

References

Loading