ykoM

168

similar to transcriptional regulator (MarR family)

Locus: BSU_13340

Molecular weight: 17.72 kDa

Isoelectric point: 9.47

Protein length: 154 aa

Gene length: 465 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: ykoM

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG1846 (Galperin et al., 2021)

Gene

Coordinates: 1,398,496  1,398,960

The protein

Domains

• HTH marR-type domain (aa 14-146) (according to UniProt)

Structure

• 3ZPL (PDB) (from Steptomyces coelicolor, corresponds to aa 17 ... 142, 24.6% identity) PubMed
• O34949 (AlphaFold)

Paralogous protein(s)

• MhqR

Expression and Regulation

Operons

• Genes: ykoM

  Description: PubMed

Biological materials

Mutant

• BKE13340 (ykoM::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATATCTACCTCGTATATAG,  downstream forward: _UP4_TTTCGTTAACTATTCTACAC
• BKK13340 (ykoM::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATATCTACCTCGTATATAG,  downstream forward: _UP4_TTTCGTTAACTATTCTACAC
• GP2873 (''ykoM::zeo''), available in Jörg Stülke's lab

References

Research papers

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