Difference between revisions of "SigM regulon"

From SubtiWiki
Jump to: navigation, search
(Genes in this regulon)
(Genes in this regulon)
 
(14 intermediate revisions by the same user not shown)
Line 2: Line 2:
 
Regulator=[[SigM]]
 
Regulator=[[SigM]]
 
}}
 
}}
 +
 +
* The [[SigM]] regulon is induced by cell wall-active antibiotics like vancomycin and bacitracin, as well as a variety of other stresses
 +
* Expression of the [[SigM]] regulon in increased in ''[[ugtP]]'' mutants {{PubMed|22362028}}
  
 
= Genes in this [[regulon]] =
 
= Genes in this [[regulon]] =
 
* ''[[abh]]''
 
* ''[[abh]]''
 +
* ''[[amj]]''
 
* ''[[bcrC]]''
 
* ''[[bcrC]]''
 
* ''[[coaX]]''
 
* ''[[coaX]]''
* ''[[ddl]]''
+
* ''[[ddl]]-[[murF]]''
 
* ''[[disA]]''
 
* ''[[disA]]''
* ''[[divIB]]''
 
 
* ''[[divIC]]''
 
* ''[[divIC]]''
* ''[[dltA]]''
+
* ''[[dltA]]-[[dltB]]-[[dltC]]-[[dltD]]-[[dltE]]''
* ''[[dltB]]''
 
* ''[[dltC]]''
 
* ''[[dltD]]''
 
* ''[[dltE]]''
 
 
* ''[[fatR]]''
 
* ''[[fatR]]''
 
* ''[[ftsH]]''
 
* ''[[ftsH]]''
Line 21: Line 20:
 
* ''[[ispD]]''
 
* ''[[ispD]]''
 
* ''[[metA]]''
 
* ''[[metA]]''
* ''[[minC]]''
+
* ''[[radC]]-[[mreB]]-[[mreC]]-[[mreD]]-[[minC]]-[[minD]]''
* ''[[minD]]''
+
* ''[[murB]]-[[divIB]]-[[ylxX]]-[[ylxW]]-[[sbp]]''
* ''[[mreB]]''
 
* ''[[mreC]]''
 
* ''[[mreD]]''
 
* ''[[murB]]''
 
* ''[[murF]]''
 
* ''[[ponA]]''
 
 
* ''[[pbpX]]''
 
* ''[[pbpX]]''
* ''[[radC]]''
 
 
* ''[[rapD]]''
 
* ''[[rapD]]''
* ''[[recU]]''
+
* ''[[recU]]-[[ponA]]''
 
* ''[[rodA]]''
 
* ''[[rodA]]''
* ''[[sbp]]''
+
* ''[[sasA]]''
 
* ''[[secDF]]''
 
* ''[[secDF]]''
* ''[[sigM]]''
+
* ''[[sigM]]-[[yhdL]]-[[yhdK]]''
 
* ''[[spx]]''
 
* ''[[spx]]''
 +
* ''[[tagT]]''
 +
* ''[[tagU]]''
 
* ''[[tilS]]''
 
* ''[[tilS]]''
 
* ''[[ugtP]]''
 
* ''[[ugtP]]''
 
* ''[[yacC]]''
 
* ''[[yacC]]''
 
* ''[[yacL]]''
 
* ''[[yacL]]''
* ''[[yceC]]''
+
* ''[[yceC]]-[[yceD]]-[[yceE]]-[[yceF]]''
* ''[[yceD]]''
 
* ''[[yceE]]''
 
* ''[[yceF]]''
 
 
* ''[[yceG]]''
 
* ''[[yceG]]''
 
* ''[[yceH]]''
 
* ''[[yceH]]''
 
* ''[[ycgQ]]''
 
* ''[[ycgQ]]''
 
* ''[[ycgR]]''
 
* ''[[ycgR]]''
* ''[[ydaH]]''
 
 
* ''[[yebC]]''
 
* ''[[yebC]]''
 
* ''[[yfnI]]''
 
* ''[[yfnI]]''
* ''[[yhdK]]''
 
* ''[[yhdL]]''
 
 
* ''[[yjbC]]''
 
* ''[[yjbC]]''
* ''[[ylxW]]''
 
* ''[[ylxX]]''
 
 
* ''[[yngC]]''
 
* ''[[yngC]]''
 
* ''[[ypbG]]''
 
* ''[[ypbG]]''
Line 65: Line 51:
 
* ''[[yrhH]]''
 
* ''[[yrhH]]''
 
* ''[[yrhJ]]''
 
* ''[[yrhJ]]''
* ''[[ytpA]]''
+
* ''[[ytpA]]-[[ytpB]]''
* ''[[ytpB]]''
 
* ''[[ywaC]]''
 
 
* ''[[ywbN]]''
 
* ''[[ywbN]]''
 
* ''[[ywbO]]''
 
* ''[[ywbO]]''
 
* ''[[ywnJ]]''
 
* ''[[ywnJ]]''
* ''[[ywtF]]''
 
  
 
= Important publications on the [[SigM]] [[regulon]] =
 
= Important publications on the [[SigM]] [[regulon]] =
<pubmed>18179421,17675383,17434969,</pubmed>
+
<pubmed>18179421,17675383,17434969,22092710 22362028,26901131</pubmed>
  
 
=Back to [[regulons]]=
 
=Back to [[regulons]]=

Latest revision as of 13:18, 24 February 2016

Regulator

SigM

  • The SigM regulon is induced by cell wall-active antibiotics like vancomycin and bacitracin, as well as a variety of other stresses
  • Expression of the SigM regulon in increased in ugtP mutants PubMed

Genes in this regulon

Important publications on the SigM regulon

John D Helmann
Bacillus subtilis extracytoplasmic function (ECF) sigma factors and defense of the cell envelope.
Curr Opin Microbiol: 2016, 30;122-132
[PubMed:26901131] [WorldCat.org] [DOI] (I p)

Satoshi Matsuoka, Minako Chiba, Yu Tanimura, Michihiro Hashimoto, Hiroshi Hara, Kouji Matsumoto
Abnormal morphology of Bacillus subtilis ugtP mutant cells lacking glucolipids.
Genes Genet Syst: 2011, 86(5);295-304
[PubMed:22362028] [WorldCat.org] [DOI] (I p)

Tina Wecke, Tobias Bauer, Henning Harth, Ulrike Mäder, Thorsten Mascher
The rhamnolipid stress response of Bacillus subtilis.
FEMS Microbiol Lett: 2011, 323(2);113-23
[PubMed:22092710] [WorldCat.org] [DOI] (I p)

Warawan Eiamphungporn, John D Helmann
The Bacillus subtilis sigma(M) regulon and its contribution to cell envelope stress responses.
Mol Microbiol: 2008, 67(4);830-48
[PubMed:18179421] [WorldCat.org] [DOI] (P p)

Thorsten Mascher, Anna-Barbara Hachmann, John D Helmann
Regulatory overlap and functional redundancy among Bacillus subtilis extracytoplasmic function sigma factors.
J Bacteriol: 2007, 189(19);6919-27
[PubMed:17675383] [WorldCat.org] [DOI] (P p)

Adrian J Jervis, Penny D Thackray, Chris W Houston, Malcolm J Horsburgh, Anne Moir
SigM-responsive genes of Bacillus subtilis and their promoters.
J Bacteriol: 2007, 189(12);4534-8
[PubMed:17434969] [WorldCat.org] [DOI] (P p)


Back to regulons