Difference between revisions of "Cell wall degradation/ turnover"
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{{CategoryTree | {{CategoryTree | ||
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* 1.1.4. [[Capsule biosynthesis and degradation]] | * 1.1.4. [[Capsule biosynthesis and degradation]] | ||
* 1.1.5. [[Cell wall/ other]] | * 1.1.5. [[Cell wall/ other]] | ||
| − | * 1.1.6. [[Cell division]] | + | * 1.1.6. [[Membrane dynamics]] |
| + | * 1.1.7. [[Cell division]] | ||
|Related= | |Related= | ||
| − | + | * [[MurR regulon]] | |
| + | * [[WalR regulon]] | ||
|}} | |}} | ||
== Genes in this functional category == | == Genes in this functional category == | ||
| + | ===Endopeptidases=== | ||
| + | * ''[[cwlK]]'' | ||
| + | *'' [[cwlO]]'' | ||
| + | * ''[[cwlS]]'' | ||
| + | * ''[[lytE]]'' | ||
| + | * ''[[lytF]]'' | ||
| + | * ''[[lytH]]'' | ||
| + | * ''[[yqgT]]'' | ||
| + | |||
| + | ===N-acetyl-β-D-glucosaminidases=== | ||
| + | * ''[[lytD]]'' | ||
| + | * ''[[lytG]]'' | ||
=== Autolysis === | === Autolysis === | ||
| − | * [[blyA]] | + | * ''[[blyA]]'' |
| − | * [[cwlA]] | + | * ''[[cwlA]]'' |
| − | * [[cwlH]] | + | *'' [[cwlH]]'' |
| − | * | + | *'' [[cwlP]]'' |
| − | + | * ''[[cwlQ]]'' | |
| − | + | * ''[[cwlT]]'' | |
| − | * [[cwlQ]] | + | * ''[[iseA]]'' |
| − | * | + | * ''[[lytA]]'' |
| − | + | * ''[[lytB]]'' | |
| − | * [[iseA]] | + | * ''[[lytC]]'' |
| − | * [[lytA]] | + | * ''[[pbpE]]'' |
| − | * [[lytB]] | + | * ''[[xepA]]'' |
| − | * [[lytC]] | + | *'' [[xlyA]]'' |
| − | * | + | * ''[[xlyB]]'' |
| − | + | *'' [[yocH]]'' | |
| − | + | * ''[[ysbB]]'' | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | * [[xepA]] | ||
| − | * [[xlyA]] | ||
| − | * [[xlyB]] | ||
| − | * [[yocH]] | ||
| − | * [[ysbB]] | ||
=== Autolysis/ based on similarity === | === Autolysis/ based on similarity === | ||
| − | * [[ykvT]] | + | * ''[[ykvT]]'' |
| − | * [[ytkC]] | + | * ''[[ytkC]]'' |
| + | |||
| + | === Degradation of wall teichoic acids === | ||
| + | * ''[[glpQ]]'' | ||
| + | * ''[[phoD]]'' | ||
=== Utilization of cell wall components === | === Utilization of cell wall components === | ||
| − | * [[amiE]] | + | * ''[[amiE]]'' |
| − | * [[gamA]] | + | * ''[[gamA]]'' |
| − | * [[gamP]] | + | * ''[[gamP]]'' |
| − | * [[murP]] | + | * ''[[murP]]'' |
| − | * [[murQ]] | + | * ''[[murQ]]'' |
| − | * [[murR]] | + | * ''[[murR]]'' |
| − | * [[nagA]] | + | *'' [[nagA]]'' |
| − | * [[nagB]] | + | * ''[[nagB]]'' |
| − | * [[nagZ]] | + | *'' [[nagZ]]'' |
| − | * [[ | + | * ''[[gamR]]'' |
| + | |||
| + | === Additional genes=== | ||
| + | * ''[[yqiI]]'' | ||
| + | |||
| + | ==Important Original Publications== | ||
| + | <pubmed>23600697, 23746506</pubmed> | ||
| + | |||
| + | ==Important Reviews== | ||
| + | <pubmed> 19019149 18792692 10708363 17468031 18266855 21796380 24035761 22944244 </pubmed> | ||
| + | |||
| + | =Back to [[categories]]= | ||
Latest revision as of 09:13, 27 October 2016
| Parent categories | |
| Neighbouring categories |
|
| Related categories | |
Contents
Genes in this functional category
Endopeptidases
N-acetyl-β-D-glucosaminidases
Autolysis
Autolysis/ based on similarity
Degradation of wall teichoic acids
Utilization of cell wall components
Additional genes
Important Original Publications
Gaurav Misra, Enrique R Rojas, Ajay Gopinathan, Kerwyn Casey Huang
Mechanical consequences of cell-wall turnover in the elongation of a Gram-positive bacterium.
Biophys J: 2013, 104(11);2342-52
[PubMed:23746506]
[WorldCat.org]
[DOI]
(I p)
Morgan Beeby, James C Gumbart, Benoît Roux, Grant J Jensen
Architecture and assembly of the Gram-positive cell wall.
Mol Microbiol: 2013, 88(4);664-72
[PubMed:23600697]
[WorldCat.org]
[DOI]
(I p)
Important Reviews
Timothy K Lee, Kerwyn Casey Huang
The role of hydrolases in bacterial cell-wall growth.
Curr Opin Microbiol: 2013, 16(6);760-6
[PubMed:24035761]
[WorldCat.org]
[DOI]
(I p)
Timna J Wyckoff, Jennifer A Taylor, Nina R Salama
Beyond growth: novel functions for bacterial cell wall hydrolases.
Trends Microbiol: 2012, 20(11);540-7
[PubMed:22944244]
[WorldCat.org]
[DOI]
(I p)
Jan Reith, Christoph Mayer
Peptidoglycan turnover and recycling in Gram-positive bacteria.
Appl Microbiol Biotechnol: 2011, 92(1);1-11
[PubMed:21796380]
[WorldCat.org]
[DOI]
(I p)
Sarah Dubrac, Paola Bisicchia, Kevin M Devine, Tarek Msadek
A matter of life and death: cell wall homeostasis and the WalKR (YycGF) essential signal transduction pathway.
Mol Microbiol: 2008, 70(6);1307-22
[PubMed:19019149]
[WorldCat.org]
[DOI]
(I p)
Sarah Dubrac, Tarek Msadek
Tearing down the wall: peptidoglycan metabolism and the WalK/WalR (YycG/YycF) essential two-component system.
Adv Exp Med Biol: 2008, 631;214-28
[PubMed:18792692]
[WorldCat.org]
[DOI]
(P p)
Waldemar Vollmer, Bernard Joris, Paulette Charlier, Simon Foster
Bacterial peptidoglycan (murein) hydrolases.
FEMS Microbiol Rev: 2008, 32(2);259-86
[PubMed:18266855]
[WorldCat.org]
[DOI]
(P p)
Edie Scheurwater, Chris W Reid, Anthony J Clarke
Lytic transglycosylases: bacterial space-making autolysins.
Int J Biochem Cell Biol: 2008, 40(4);586-91
[PubMed:17468031]
[WorldCat.org]
[DOI]
(P p)
Thomas J Smith, Steve A Blackman, Simon J Foster
Autolysins of Bacillus subtilis: multiple enzymes with multiple functions.
Microbiology (Reading): 2000, 146 ( Pt 2);249-262
[PubMed:10708363]
[WorldCat.org]
[DOI]
(P p)
