Difference between revisions of "Template"

From SubtiWiki
Jump to: navigation, search
 
(29 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
* '''Synonyms:'''
+
* '''Description:''' write here <br/><br/>
 +
 
 +
{| align="right" border="1" cellpadding="2"
 +
|-
 +
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 +
|''genE''
 +
|-
 +
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 +
|-
 +
|style="background:#ABCDEF;" align="center"| '''Essential''' || write here
 +
|-
 +
|style="background:#ABCDEF;" align="center"| '''Product''' || write here
 +
|-
 +
|style="background:#ABCDEF;" align="center"|'''Function''' || write here
 +
|-
 +
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || xx,x kDa, y.yy
 +
|-
 +
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || aaa bp, bbb amino acids
 +
|-
 +
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[genA]]'', ''[[genB]]''
 +
|-
 +
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_nucleotide.txt    Gene sequence      (+200bp)  ]'''
 +
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_protein.txt Protein sequence]'''
 +
|-
 +
|colspan="2" | '''Genetic context''' <br/> [[Image:genE_context.gif]]
 +
|-
 +
|}
 +
 
 +
__TOC__
 +
 
 +
<br/><br/>
  
−
* '''Description:'''
 
−
 
 
=The gene=
 
=The gene=
  
−
== Basic information ==
+
=== Basic information ===
−
 
 
−
* '''Coordinates:'''
 
  
−
* '''Gene length:'''
+
* '''Locus tag:'''
  
−
==Phenotypes of a Mutant ==
+
===Phenotypes of a mutant ===
  
−
== Database entries ==
+
=== Database entries ===
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/rocG.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/rocG.html]
  
 
* '''SubtiList entry:'''
 
* '''SubtiList entry:'''
 +
 +
=== Additional information===
  
 
=The protein=
 
=The protein=
  
−
== Basic information/ Evolution ==
+
=== Basic information/ Evolution ===
  
 
* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
Line 29: Line 57:
 
* '''Paralogous protein(s):'''
 
* '''Paralogous protein(s):'''
  
−
== Database entries ==
+
=== Extended information on the protein ===
  
−
* '''Structure'''
+
* '''Kinetic information:'''
  
−
* '''Swiss prot entry'''
+
* '''Domains:'''  
  
−
* '''KEGG entry'''
+
* '''Modification:'''
  
−
== Extended information on the protein ==
+
* '''Cofactor(s):'''
  
−
* '''Kinetic information'''
+
* '''Effectors of protein activity:'''
  
−
* '''Domains'''  
+
* '''Interactions:'''
  
−
* '''Modification'''
+
* '''Localization:'''
  
−
* '''Effectors of protein activity:'''
+
=== Database entries ===
 +
 
 +
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=abcd abcd]
 +
 
 +
* '''Swiss prot entry:'''
 +
 
 +
* '''KEGG entry:'''
  
−
* '''Interactions:'''
+
* '''E.C. number:'''
  
−
* '''Localization'''
+
=== Additional information===
  
−
=Expression and Regulation=
+
=Expression and regulation=
  
 
* '''Operon:'''  
 
* '''Operon:'''  
Line 61: Line 95:
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
−
=Biological Materials =
+
* '''Additional information:'''
 +
 
 +
=Biological materials =
  
 
* '''Mutant:'''
 
* '''Mutant:'''
Line 71: Line 107:
 
* '''GFP fusion:'''
 
* '''GFP fusion:'''
  
−
* '''Antibody:'''  
+
* '''two-hybrid system:'''  
  
 +
* '''Antibody:'''
  
 
=Labs working on this gene/protein=
 
=Labs working on this gene/protein=
  
−
=Additional remarks=
+
=Your additional remarks=
  
 
=References=
 
=References=
  
−
# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID]
+
<pubmed> 19422832  </pubmed>
 +
 
 +
[http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=DetailsSearch&term=subtilis+codY&log$=activity search PubMed]

Latest revision as of 19:47, 15 June 2009

  • Description: write here

Gene name genE
Synonyms
Essential write here
Product write here
Function write here
MW, pI xx,x kDa, y.yy
Gene length, protein length aaa bp, bbb amino acids
Immediate neighbours genA, genB
Gene sequence (+200bp) Protein sequence
Genetic context
File:GenE context.gif



The gene

Basic information

  • Locus tag:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry:

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Begoña Carrasco, Cristina Cañas, Gary J Sharples, Juan C Alonso, Silvia Ayora
The N-terminal region of the RecU holliday junction resolvase is essential for homologous recombination.
J Mol Biol: 2009, 390(1);1-9
[PubMed:19422832] [WorldCat.org] [DOI] (I p)


search PubMed

Retrieved from "https://subtiwiki.uni-goettingen.de/wiki//index.php?title=Template&oldid=96423"