Difference between revisions of "Template"
(→Database entries) |
|||
| (18 intermediate revisions by 3 users not shown) | |||
| Line 1: | Line 1: | ||
| − | * '''Synonyms:''' | + | * '''Description:''' write here <br/><br/> |
| + | |||
| + | {| align="right" border="1" cellpadding="2" | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"|'''Gene name''' | ||
| + | |''genE'' | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"| '''Essential''' || write here | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"| '''Product''' || write here | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"|'''Function''' || write here | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || xx,x kDa, y.yy | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || aaa bp, bbb amino acids | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[genA]]'', ''[[genB]]'' | ||
| + | |- | ||
| + | |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_nucleotide.txt Gene sequence (+200bp) ]''' | ||
| + | |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_protein.txt Protein sequence]''' | ||
| + | |- | ||
| + | |colspan="2" | '''Genetic context''' <br/> [[Image:genE_context.gif]] | ||
| + | |- | ||
| + | |} | ||
| + | |||
| + | __TOC__ | ||
| + | |||
| + | <br/><br/> | ||
| − | |||
| − | |||
=The gene= | =The gene= | ||
| − | == Basic information == | + | === Basic information === |
| − | |||
| − | |||
| − | * ''' | + | * '''Locus tag:''' |
| − | ==Phenotypes of a mutant == | + | ===Phenotypes of a mutant === |
| − | == Database entries == | + | === Database entries === |
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/rocG.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/rocG.html] | ||
| Line 19: | Line 45: | ||
* '''SubtiList entry:''' | * '''SubtiList entry:''' | ||
| − | == Additional information== | + | === Additional information=== |
| − | |||
=The protein= | =The protein= | ||
| − | == Basic information/ Evolution == | + | === Basic information/ Evolution === |
* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| Line 32: | Line 57: | ||
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
| − | == Extended information on the protein == | + | === Extended information on the protein === |
* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| Line 48: | Line 73: | ||
* '''Localization:''' | * '''Localization:''' | ||
| − | == Database entries == | + | === Database entries === |
| − | * '''Structure:''' | + | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=abcd abcd] |
* '''Swiss prot entry:''' | * '''Swiss prot entry:''' | ||
| Line 58: | Line 83: | ||
* '''E.C. number:''' | * '''E.C. number:''' | ||
| − | == Additional information== | + | === Additional information=== |
| − | |||
=Expression and regulation= | =Expression and regulation= | ||
| Line 83: | Line 107: | ||
* '''GFP fusion:''' | * '''GFP fusion:''' | ||
| − | * ''' | + | * '''two-hybrid system:''' |
| + | * '''Antibody:''' | ||
=Labs working on this gene/protein= | =Labs working on this gene/protein= | ||
| Line 92: | Line 117: | ||
=References= | =References= | ||
| − | + | <pubmed> 19422832 </pubmed> | |
| + | |||
| + | [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=DetailsSearch&term=subtilis+codY&log$=activity search PubMed] | ||
Latest revision as of 19:47, 15 June 2009
- Description: write here
| Gene name | genE |
| Synonyms | |
| Essential | write here |
| Product | write here |
| Function | write here |
| MW, pI | xx,x kDa, y.yy |
| Gene length, protein length | aaa bp, bbb amino acids |
| Immediate neighbours | genA, genB |
| Gene sequence (+200bp) | Protein sequence |
| Genetic context File:GenE context.gif | |
Contents
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry:
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: abcd
- Swiss prot entry:
- KEGG entry:
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Begoña Carrasco, Cristina Cañas, Gary J Sharples, Juan C Alonso, Silvia Ayora
The N-terminal region of the RecU holliday junction resolvase is essential for homologous recombination.
J Mol Biol: 2009, 390(1);1-9
[PubMed:19422832]
[WorldCat.org]
[DOI]
(I p)
