Difference between revisions of "CydC"

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(Expression and regulation)
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* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
  
* '''Regulation:''' repressed by glucose ([[CcpA]]), induced under anaerobic conditions ([[Rex]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/16207915 PubMed]
+
* '''Regulation:'''  
** repressed at regular oxygen concentration ([[Rex]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/15231791 PubMed]
+
** repressed by glucose ([[CcpA]])  
 +
** induced under anaerobic conditions ([[Rex]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/16207915 PubMed]
 
** expressed under anaerobic conditions ([[ResD]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/17322317 PubMed]
 
** expressed under anaerobic conditions ([[ResD]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/17322317 PubMed]
  
* '''Regulatory mechanism:''' [[CcpA]]: transcription repression, [[Rex]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/16207915 PubMed]
+
* '''Regulatory mechanism:'''  
** [[Rex]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/15231791 PubMed]
+
** [[CcpA]]: transcription repression  
 +
** [[Rex]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/15231791 PubMed]
 
** [[ResD]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/17322317 PubMed]
 
** [[ResD]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/17322317 PubMed]
  

Revision as of 05:14, 12 June 2009

  • Description: ABC transporter required for expression of cytochrome bd (ATP-binding protein)

Gene name cydC
Synonyms yxkM
Essential no
Product ABC transporter (ATP-binding protein)
Function required for expression of cytochrome bd
MW, pI 62 kDa, 8.511
Gene length, protein length 1701 bp, 567 aa
Immediate neighbours cydD, cydB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CydC context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU38740

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed by glucose (CcpA)
    • induced under anaerobic conditions (Rex) PubMed
    • expressed under anaerobic conditions (ResD) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed