Difference between revisions of "LiaH"

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Line 93: Line 93:
  
 
* '''Regulation:''' induced by bacitracin ([[LiaR]])
 
* '''Regulation:''' induced by bacitracin ([[LiaR]])
 +
** repressed during logrithmic growth ([[AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/15101989,17660417 PubMed]
  
 
* '''Regulatory mechanism:''' [[LiaR]]: transcription activation
 
* '''Regulatory mechanism:''' [[LiaR]]: transcription activation
 +
** [[AbrB]]:  transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/15101989,17660417 PubMed]
  
 
* '''Additional information:'''
 
* '''Additional information:'''

Revision as of 16:13, 11 June 2009

  • Description: protection against daptamycin

Gene name liaH
Synonyms yvqH
Essential no
Product unknown
Function protection against daptamycin
MW, pI 25 kDa, 6.172
Gene length, protein length 675 bp, 225 aa
Immediate neighbours liaG, liaI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvqH context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU33120

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: pspA/IM30 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: induced by bacitracin (LiaR)
  • Regulatory mechanism: LiaR: transcription activation
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Thorsten Mascher, Karlsruhe Institute of Technology, Germany link

Your additional remarks

References

Sina Jordan, Anja Junker, John D Helmann, Thorsten Mascher
Regulation of LiaRS-dependent gene expression in bacillus subtilis: identification of inhibitor proteins, regulator binding sites, and target genes of a conserved cell envelope stress-sensing two-component system.
J Bacteriol: 2006, 188(14);5153-66
[PubMed:16816187] [WorldCat.org] [DOI] (P p)

  1. Jordan, S., A. Junker, J. D. Helmann, and T. Mascher. 2006. Regulation of LiaRS-dependent gene expression in Bacillus subtilis: identification of inhibitor proteins, regulator binding sites, and target genes of a conserved cell envelope stress-sensing two-component system. J. Bacteriol. 188: 5153-5166. PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed