Difference between revisions of "TrnB-Lys"

From SubtiWiki
Jump to: navigation, search
(New page: * '''Description:''' write here <br/><br/> {| align="right" border="1" cellpadding="2" |- |style="background:#ABCDEF;" align="center"|'''Gene name''' |''trnB-Lys'' |- |style="background:...)
 
Line 4: Line 4:
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''trnB-Lys''
+
|''genE''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''trnE ''
+
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' ||  
+
|style="background:#ABCDEF;" align="center"| '''Essential''' || write here
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || transfer RNA-Lys
+
|style="background:#ABCDEF;" align="center"| '''Product''' || write here
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' ||  
+
|style="background:#ABCDEF;" align="center"|'''Function''' || write here
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || kDa,  
+
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || xx,x kDa, y.yy
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || bp, aa
+
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || aaa bp, bbb amino acids
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[genA]]'', ''[[genB]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/trnB-Lys_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
+
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/trnB-Lys_protein.txt Protein sequence]'''
+
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_protein.txt Protein sequence]'''
 
|-
 
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:trnB-Lys_context.gif]]
+
|colspan="2" | '''Genetic context''' <br/> [[Image:genE_context.gif]]
 
|-
 
|-
 
|}
 
|}
Line 35: Line 35:
 
=== Basic information ===
 
=== Basic information ===
  
* '''Coordinates:'''
+
* '''Coordinates (CDS):'''
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
Line 41: Line 41:
 
=== Database entries ===
 
=== Database entries ===
  
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/trnB-Lys.html]
+
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/rocG.html]
  
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG00076]
+
* '''SubtiList entry:'''
  
 
=== Additional information===
 
=== Additional information===
Line 103: Line 103:
  
 
* '''Expression vector:'''
 
* '''Expression vector:'''
       
+
 
* '''lacZ fusion:'''
 
* '''lacZ fusion:'''
  

Revision as of 14:56, 4 February 2009

  • Description: write here

Gene name genE
Synonyms
Essential write here
Product write here
Function write here
MW, pI xx,x kDa, y.yy
Gene length, protein length aaa bp, bbb amino acids
Immediate neighbours genA, genB
Gene sequence (+200bp) Protein sequence
Genetic context
File:GenE context.gif



The gene

Basic information

  • Coordinates (CDS):

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry:

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed