Difference between revisions of "TrmD"
| Line 35: | Line 35: | ||
=== Basic information === | === Basic information === | ||
| − | * '''Locus tag:''' | + | * '''Locus tag:''' BSU16030 |
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| Line 82: | Line 82: | ||
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O31741 O31741] | * '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O31741 O31741] | ||
| − | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+ | + | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU16030] |
* '''E.C. number:''' [http://www.expasy.org/enzyme/2.1.1.31 2.1.1.31] | * '''E.C. number:''' [http://www.expasy.org/enzyme/2.1.1.31 2.1.1.31] | ||
Revision as of 12:14, 3 June 2009
- Description: tRNA methyltransferase
| Gene name | trmD |
| Synonyms | |
| Essential | yes PubMed |
| Product | tRNA methyltransferase |
| Function | tRNA modification |
| MW, pI | 27 kDa, 5.309 |
| Gene length, protein length | 729 bp, 243 aa |
| Immediate neighbours | rimM, rplS |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU16030
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N(1)-methylguanine (according to Swiss-Prot)
- Protein family: RNA methyltransferase trmD family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- Swiss prot entry: O31741
- KEGG entry: [2]
- E.C. number: 2.1.1.31
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
