Difference between revisions of "GanB"
| Line 35: | Line 35: | ||
=== Basic information === | === Basic information === | ||
| − | * '''Locus tag:''' | + | * '''Locus tag:''' BSU34120 |
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| Line 80: | Line 80: | ||
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O07013 O07013] | * '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O07013 O07013] | ||
| − | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+ | + | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU34120] |
* '''E.C. number:''' [http://www.expasy.org/enzyme/3.2.1.89 3.2.1.89] | * '''E.C. number:''' [http://www.expasy.org/enzyme/3.2.1.89 3.2.1.89] | ||
Revision as of 11:07, 3 June 2009
- Description: similar to arabinogalactan endo-1,4-beta-galactosidase
| Gene name | yvfO |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 47 kDa, 8.243 |
| Gene length, protein length | 1287 bp, 429 aa |
| Immediate neighbours | rsbP, lacA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU34120
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Endohydrolysis of (1->4)-beta-D-galactosidic linkages in arabinogalactans (according to Swiss-Prot)
- Protein family: glycosyl hydrolase 53 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 2J74 (B. licheniformis)
- Swiss prot entry: O07013
- KEGG entry: [3]
- E.C. number: 3.2.1.89
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
