Difference between revisions of "CwlD"

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(Expression and regulation)
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''[[ybaK]]-[[cwlD]]''
+
* '''Operon:'''  
 +
** ''[[ybaK]]-[[cwlD]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/7559346 PubMed]
 +
** ''[[cwlD]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/7559346 PubMed]
  
* '''[[Sigma factor]]:''' [[SigE]], [[SigG]]
+
* '''[[Sigma factor]]:'''
 +
** ''[[ybaK]]'': [[SigG]] [http://www.ncbi.nlm.nih.gov/sites/entrez/7559346 PubMed]
 +
** ''[[cwlD]]'': [[SigE]] [http://www.ncbi.nlm.nih.gov/sites/entrez/7559346 PubMed]
  
* '''Regulation:'''  
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* '''Regulation:''' expressed during sporulation ([[SigG]], [[SigE]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/7559346 PubMed]
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  

Revision as of 20:40, 1 June 2009

  • Description: N-acetylmuramoyl-L-alanine amidase

Gene name cwlD
Synonyms
Essential no
Product N-acetylmuramoyl-L-alanine amidase
Function spore germination
MW, pI 26 kDa, 9.788
Gene length, protein length 711 bp, 237 aa
Immediate neighbours ybaK, salA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CwlD context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides (according to Swiss-Prot)
  • Protein family: N-acetylmuramoyl-L-alanine amidase 3 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: secreted (according to Swiss-Prot)

Database entries

  • Structure:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed