Difference between revisions of "SigX"
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=== Genes controlled by SigX === | === Genes controlled by SigX === | ||
| − | ''[[pbpX]]'', ''[[csbB]]'', ''[[abh]]'', ''[[dltA]]-[[dltB]]-[[dltC]]-[[dltD]]-[[dltE]]'' | + | ''[[abh]], [[pbpX]]'', ''[[csbB]]'', ''[[abh]]'', ''[[dltA]]-[[dltB]]-[[dltC]]-[[dltD]]-[[dltE]]'' |
=== Extended information on the protein === | === Extended information on the protein === | ||
Revision as of 20:51, 29 May 2009
- Description: RNA polymerase ECF-type sigma factor SigX
| Gene name | sigX |
| Synonyms | ypuM |
| Essential | no |
| Product | RNA polymerase ECF-type sigma factor SigX |
| Function | cell surface properties |
| MW, pI | 23 kDa, 6.086 |
| Gene length, protein length | 582 bp, 194 aa |
| Immediate neighbours | rsiX, resE |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ECF subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Genes controlled by SigX
abh, pbpX, csbB, abh, dltA-dltB-dltC-dltD-dltE
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- Swiss prot entry: P35165
- KEGG entry: BSU23100
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Yun Luo, John D Helmann
Extracytoplasmic function sigma factors with overlapping promoter specificity regulate sublancin production in Bacillus subtilis.
J Bacteriol: 2009, 191(15);4951-8
[PubMed:19465659]
[WorldCat.org]
[DOI]
(I p)
Masakuni Serizawa, Keisuke Kodama, Hiroki Yamamoto, Kazuo Kobayashi, Naotake Ogasawara, Junichi Sekiguchi
Functional analysis of the YvrGHb two-component system of Bacillus subtilis: identification of the regulated genes by DNA microarray and northern blot analyses.
Biosci Biotechnol Biochem: 2005, 69(11);2155-69
[PubMed:16306698]
[WorldCat.org]
[DOI]
(P p)
X Huang, J D Helmann
Identification of target promoters for the Bacillus subtilis sigma X factor using a consensus-directed search.
J Mol Biol: 1998, 279(1);165-73
[PubMed:9636707]
[WorldCat.org]
[DOI]
(P p)
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
