Difference between revisions of "PadC"

From SubtiWiki
Jump to: navigation, search
(Expression and regulation)
(Expression and regulation)
Line 88: Line 88:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''[[yveF]]-[[yveG]]-[[padC]]''
+
* '''Operon:''' ''[[yveF]]-[[yveG]]-[[padC]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/18326577 PubMed]
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
  
* '''Regulation:''' induced by phenolic acid ([[PadR]])
+
* '''Regulation:''' induced by phenolic acid ([[PadR]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/18326577 PubMed]
  
* '''Regulatory mechanism:''' [[PadR]]: transcription repression
+
* '''Regulatory mechanism:''' [[PadR]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/18326577 PubMed]
  
 
* '''Additional information:'''
 
* '''Additional information:'''

Revision as of 17:15, 8 May 2009

  • Description: phenolic acid decarboxylase

Gene name padC
Synonyms pad, yveH
Essential no
Product phenolic acid decarboxylase
Function resistance to salicylic acid
MW, pI 18 kDa, 4.871
Gene length, protein length 483 bp, 161 aa
Immediate neighbours pnbA, yveG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
PadC context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: induced by phenolic acid (PadR) PubMed
  • Regulatory mechanism: PadR: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed