Difference between revisions of "YdbD"

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Line 54: Line 54:
 
* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
  
* '''Protein family:'''
+
* '''Protein family:''' manganese catalase family (according to Swiss-Prot)
  
 
* '''Paralogous protein(s):''' [[YjqC]]
 
* '''Paralogous protein(s):''' [[YjqC]]

Revision as of 19:24, 7 May 2009

  • Description: general stress protein, similar to manganese-containing catalase

Gene name ydbD
Synonyms
Essential no
Product unknown
Function survival of ethanol stress
MW, pI 30 kDa, 4.858
Gene length, protein length 819 bp, 273 aa
Immediate neighbours ydbC, dctB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdbD context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: manganese catalase family (according to Swiss-Prot)
  • Paralogous protein(s): YjqC

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Höper et al. (2005) Comprehensive Characterization of the Contribution of Individual SigB-Dependent General Stress Genes to Stress Resistance of Bacillus subtilis. J. Bact. 187: 2810-2826 PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed