Difference between revisions of "Hbs"
| Line 78: | Line 78: | ||
=== Database entries === | === Database entries === | ||
| − | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1EXE 1EXE] (phage SPO1 transcription factor, 45% identity) | + | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1HUU 1HUU] (Geobacillus stearothermophilus), [http://www.rcsb.org/pdb/explore.do?structureId=1EXE 1EXE] (phage SPO1 transcription factor, 45% identity) |
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P42305 P42305] | * '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P42305 P42305] | ||
Revision as of 22:21, 5 May 2009
- Description: non-specific DNA-binding protein Hbsu
| Gene name | hbs |
| Synonyms | dbpA |
| Essential | yes PubMed |
| Product | non-specific DNA-binding protein Hbsu |
| Function | DNA packaging, function of the signal recognition complex |
| MW, pI | 9 kDa, 9.501 |
| Gene length, protein length | 276 bp, 92 aa |
| Immediate neighbours | mtrA, spoIVA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylation on Thr-4 PubMed
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot), membrane associated PubMed
Database entries
- Structure: 1HUU (Geobacillus stearothermophilus), 1EXE (phage SPO1 transcription factor, 45% identity)
- Swiss prot entry: P42305
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Ciaran Condon, IBPC, Paris, France Homepage
Your additional remarks
References
- Hahne et al. (2008) From complementarity to comprehensiveness - targeting the membrane proteome of growing Bacillus subtilis by divergent approaches. Proteomics 8: 4123-4136 PubMed
- Macek et al. (2007) The serine/ threonine/ tyrosine phosphoproteome of the model bacterium Bacillus subtilis. Mol. Cell. Proteomics 6: 697-707 PubMed
- Daou-Chabo R, Mathy N, Bénard L, Condon C. (2009) Ribosomes initiating translation of the hbs mRNA protect it from 5'-to-3' exoribonucleolytic degradation by RNase J1. Mol. Microbiol. 71: 1538-1550. PubMed
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
