Difference between revisions of "FatR"

From SubtiWiki
Jump to: navigation, search
Line 91: Line 91:
 
* '''Operon:''' ''[[fatR]]-[[yrhJ]]''  
 
* '''Operon:''' ''[[fatR]]-[[yrhJ]]''  
  
* '''Sigma factor:''' [[SigA]]
+
* '''[[Sigma factor]]:''' [[SigA]]
  
 
* '''Regulation:''' induced by unsaturated fatty acids ([[FatR]])
 
* '''Regulation:''' induced by unsaturated fatty acids ([[FatR]])

Revision as of 09:03, 8 April 2009

  • Description: transcriptional repressor of the fatR-yrhJ operon

Gene name fatR
Synonyms yrhI, bscR
Essential no
Product transcriptional repressor
of the fatR yrhJ operon (TetR family)
Function unknown
MW, pI 22 kDa, 5.621
Gene length, protein length 582 bp, 194 aa
Immediate neighbours yrhJ, yrhH
Gene sequence (+200bp) Protein sequence
Genetic context
YrhI context.gif
This image was kindly provided by SubtiList




The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: induced by unsaturated fatty acids (FatR)
  • Regulatory mechanism: FatR: transcription repression
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed