Difference between revisions of "Protein families"
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* [[ABC transporter superfamily]] | * [[ABC transporter superfamily]] | ||
* [[ABCF ATPase subfamily]] | * [[ABCF ATPase subfamily]] | ||
| + | * [[ABC-2 integral membrane protein family]] | ||
* [[ABC-4 integral membrane protein family]] | * [[ABC-4 integral membrane protein family]] | ||
* [[Acetyltransferase family]] | * [[Acetyltransferase family]] | ||
| Line 9: | Line 10: | ||
* [[Aldehyde dehydrogenase family]] | * [[Aldehyde dehydrogenase family]] | ||
* [[Aldo/keto reductase family]] | * [[Aldo/keto reductase family]] | ||
| + | * [[Aldo/keto reductase 2 subfamily]] | ||
* [[Alpha/beta-type SASP family]] | * [[Alpha/beta-type SASP family]] | ||
* [[Amino acid-polyamine-organocation (APC) superfamily]] | * [[Amino acid-polyamine-organocation (APC) superfamily]] | ||
* [[ATP-dependent AMP-binding enzyme family]] | * [[ATP-dependent AMP-binding enzyme family]] | ||
| + | * [[Autoinducer-2 exporter (AI-2E) (TC 2.A.86) family]] | ||
* [[Bacterial solute-binding protein 1 family]] | * [[Bacterial solute-binding protein 1 family]] | ||
* [[Bacterial solute-binding protein 3 family]] | * [[Bacterial solute-binding protein 3 family]] | ||
| + | * [[Bacterial solute-binding protein 5 family]] | ||
* [[Bacterial solute-binding protein 8 family]] | * [[Bacterial solute-binding protein 8 family]] | ||
| + | * [[Beta-lactamase family]] | ||
* [[Binding-protein-dependent transport system permease family]] | * [[Binding-protein-dependent transport system permease family]] | ||
* [[Carbohydrate kinase PfkB family]] | * [[Carbohydrate kinase PfkB family]] | ||
| + | * [[Catalase family]] | ||
* [[Cation diffusion facilitator (CDF) transporter (TC 2.A.4) family]] | * [[Cation diffusion facilitator (CDF) transporter (TC 2.A.4) family]] | ||
* [[Cation transport ATPase (P-type) (TC 3.A.3) family]] | * [[Cation transport ATPase (P-type) (TC 3.A.3) family]] | ||
| + | * [[CdaR family]] | ||
* [[CitM transporter family (TC 2.A.11)]] | * [[CitM transporter family (TC 2.A.11)]] | ||
* [[Class-I aminoacyl-tRNA synthetase family]] | * [[Class-I aminoacyl-tRNA synthetase family]] | ||
* [[Class-II aminoacyl-tRNA synthetase family]] | * [[Class-II aminoacyl-tRNA synthetase family]] | ||
| + | * [[Class I-like SAM-binding methyltransferase superfamily]] | ||
* [[Class-I pyridoxal-phosphate-dependent aminotransferase family]] | * [[Class-I pyridoxal-phosphate-dependent aminotransferase family]] | ||
* [[Class-II pyridoxal-phosphate-dependent aminotransferase family]] | * [[Class-II pyridoxal-phosphate-dependent aminotransferase family]] | ||
| Line 27: | Line 35: | ||
* [[Class-IV pyridoxal-phosphate-dependent aminotransferase family]] | * [[Class-IV pyridoxal-phosphate-dependent aminotransferase family]] | ||
* [[Class-V pyridoxal-phosphate-dependent aminotransferase family]] | * [[Class-V pyridoxal-phosphate-dependent aminotransferase family]] | ||
| + | * [[Classic translation factor GTPase family]] | ||
| + | * [[Cof family]] | ||
| + | * [[CotF family]] | ||
* [[CysTW subfamily]] | * [[CysTW subfamily]] | ||
* [[Cytidine and deoxycytidylate deaminase family]] | * [[Cytidine and deoxycytidylate deaminase family]] | ||
| + | * [[Cytochrome P450 family]] | ||
* [[Dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family]] | * [[Dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family]] | ||
| + | * [[DinB family]] | ||
* [[DNA polymerase type-Y family]] | * [[DNA polymerase type-Y family]] | ||
| + | * [[Drug/metabolite transporter (DMT) superfamily]] | ||
* [[EamA transporter family]] | * [[EamA transporter family]] | ||
* [[ECF subfamily]] | * [[ECF subfamily]] | ||
* [[EmrB family]] | * [[EmrB family]] | ||
| + | * [[Enoyl-CoA hydratase/isomerase family]] | ||
| + | * [[Extradiol ring-cleavage dioxygenase family]] | ||
| + | * [[FecCD subfamily]] | ||
| + | * [[FGGY kinase family]] | ||
* [[Flagella basal body rod proteins family]] | * [[Flagella basal body rod proteins family]] | ||
* [[FtsA/MreB family]] | * [[FtsA/MreB family]] | ||
* [[Fur family]] | * [[Fur family]] | ||
| + | * [['GDSL' lipolytic enzyme family]] | ||
* [[GerABKA family]] | * [[GerABKA family]] | ||
* [[GerABKC lipoprotein family]] | * [[GerABKC lipoprotein family]] | ||
| + | * [[GerPA/GerPF family]] | ||
* [[Gfo/Idh/MocA family]] | * [[Gfo/Idh/MocA family]] | ||
* [[Glycosyl hydrolase 1 family]] | * [[Glycosyl hydrolase 1 family]] | ||
| Line 44: | Line 64: | ||
* [[Glycosyl hydrolase 13 family]] | * [[Glycosyl hydrolase 13 family]] | ||
* [[Glycosyl hydrolase 18 family]] | * [[Glycosyl hydrolase 18 family]] | ||
| + | * [[Glycosyl hydrolase 43 family]] | ||
* [[Glycosyltransferase 1 family]] | * [[Glycosyltransferase 1 family]] | ||
* [[Glycosyltransferase 2 family]] | * [[Glycosyltransferase 2 family]] | ||
| + | * [[Glycosyltransferase 4 subfamily]] | ||
| + | * [[Glycosyltransferase 51 family]] | ||
* [[HAD superfamily]] | * [[HAD superfamily]] | ||
* [[Helicase family]] | * [[Helicase family]] | ||
* [[Isochorismatase family]] | * [[Isochorismatase family]] | ||
* [[LacI family]] | * [[LacI family]] | ||
| + | * [[LTA synthase family]] | ||
| + | * [[Lyase 1 family]] | ||
* [[Major facilitator superfamily]] | * [[Major facilitator superfamily]] | ||
| + | * [[MalFG subfamily]] | ||
| + | * [[Malic enzymes family]] | ||
* [[Mandelate racemase/muconate lactonizing enzyme family]] | * [[Mandelate racemase/muconate lactonizing enzyme family]] | ||
* [[Membrane fusion protein (MFP) (TC 8.A.1) family]] | * [[Membrane fusion protein (MFP) (TC 8.A.1) family]] | ||
| Line 59: | Line 86: | ||
* [[Methyltransferase superfamily]] | * [[Methyltransferase superfamily]] | ||
* [[MscS (TC 1.A.23) family]] | * [[MscS (TC 1.A.23) family]] | ||
| + | * [[Multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family]] | ||
| + | * [[MurCDEF family]] | ||
* [[N-acetylmuramoyl-L-alanine amidase 2 family]] | * [[N-acetylmuramoyl-L-alanine amidase 2 family]] | ||
* [[N-acetylmuramoyl-L-alanine amidase 3 family]] | * [[N-acetylmuramoyl-L-alanine amidase 3 family]] | ||
* [[NAD(P)-dependent epimerase/dehydratase family]] | * [[NAD(P)-dependent epimerase/dehydratase family]] | ||
| + | * [[Nitroreductase family]] | ||
| + | * [[Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily]] | ||
* [[Nudix hydrolase]]s | * [[Nudix hydrolase]]s | ||
| + | * [[OppBC subfamily]] | ||
| + | * [[4-oxalocrotonate tautomerase family]] | ||
* [[2-oxoacid dehydrogenase family]] | * [[2-oxoacid dehydrogenase family]] | ||
| + | * [[Peptidase C40 family]] | ||
| + | * [[Peptidase C56 family]] | ||
* [[Peptidase M16 family]] | * [[Peptidase M16 family]] | ||
* [[Peptidase M20 family]] | * [[Peptidase M20 family]] | ||
| + | * [[Peptidase M20A family]] | ||
| + | * [[Peptidase M50B family]] | ||
* [[Peptidase S8 family]] | * [[Peptidase S8 family]] | ||
* [[Peptidase S11 family]] | * [[Peptidase S11 family]] | ||
* [[Peptidase S26 family]] | * [[Peptidase S26 family]] | ||
| − | |||
* [[Peptidase S54 family]] | * [[Peptidase S54 family]] | ||
| + | * [[PEP-utilizing enzyme family]] | ||
* [[Peroxiredoxin family]] | * [[Peroxiredoxin family]] | ||
* [[Phage integrase family]] | * [[Phage integrase family]] | ||
| Line 84: | Line 121: | ||
* [[RAP family]] | * [[RAP family]] | ||
* [[S-transferase-like (STL) superfamily]] | * [[S-transferase-like (STL) superfamily]] | ||
| + | * [[SEDS proteins]] | ||
| + | * [[Ser/Thr protein kinase family]] | ||
* [[Short-chain dehydrogenases/reductases (SDR) family]] | * [[Short-chain dehydrogenases/reductases (SDR) family]] | ||
| − | |||
* [[Sigma-70 factor family]] | * [[Sigma-70 factor family]] | ||
* [[Site-specific recombinase resolvase family]] | * [[Site-specific recombinase resolvase family]] | ||
| − | * [[ | + | * [[Small heat shock protein (Hsp20) family]] |
| + | * [[Small multidrug resistance (SMR) (TC 2.A.7.1) family]] | ||
* [[Sodium:galactoside symporter (TC 2.A.2) family]] | * [[Sodium:galactoside symporter (TC 2.A.2) family]] | ||
* [[Sodium:solute symporter (SSF) (TC 2.A.21) family]] | * [[Sodium:solute symporter (SSF) (TC 2.A.21) family]] | ||
| Line 96: | Line 135: | ||
* [[Sugar phosphate cyclases superfamily]] | * [[Sugar phosphate cyclases superfamily]] | ||
* [[Sugar transporter (TC 2.A.1.1) family]] | * [[Sugar transporter (TC 2.A.1.1) family]] | ||
| + | * [[TCR/Tet family]] | ||
* [[TerC family]] | * [[TerC family]] | ||
* [[TetR family]] | * [[TetR family]] | ||
| + | * [[Thiolase-like superfamily]] | ||
* [[Thioredoxin family]] | * [[Thioredoxin family]] | ||
* [[4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family]] | * [[4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family]] | ||
| + | * [[TPP enzyme family]] | ||
* [[TRAFAC class translation factor GTPase superfamily]] | * [[TRAFAC class translation factor GTPase superfamily]] | ||
| + | * [[TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily]] | ||
* [[Transferase hexapeptide repeat family]] | * [[Transferase hexapeptide repeat family]] | ||
| + | * [[Transpeptidase family]] | ||
| + | * [[UPF0053 family]] | ||
* [[UPF0702 family]] | * [[UPF0702 family]] | ||
| + | * [[UPF0714 family]] | ||
* [[UPF0750 membrane proteins]] | * [[UPF0750 membrane proteins]] | ||
| + | * [[Xanthine/uracil permease family]] | ||
* [[Xre family]] | * [[Xre family]] | ||
* [[Zinc-containing alcohol dehydrogenase family]] | * [[Zinc-containing alcohol dehydrogenase family]] | ||
Latest revision as of 11:00, 10 July 2019
- AAA ATPase family
- AB hydrolase superfamily
- ABC transporter superfamily
- ABCF ATPase subfamily
- ABC-2 integral membrane protein family
- ABC-4 integral membrane protein family
- Acetyltransferase family
- Acyl-CoA dehydrogenase family
- Alanine or glycine:cation symporter (AGCS) (TC 2.A.25) family
- Aldehyde dehydrogenase family
- Aldo/keto reductase family
- Aldo/keto reductase 2 subfamily
- Alpha/beta-type SASP family
- Amino acid-polyamine-organocation (APC) superfamily
- ATP-dependent AMP-binding enzyme family
- Autoinducer-2 exporter (AI-2E) (TC 2.A.86) family
- Bacterial solute-binding protein 1 family
- Bacterial solute-binding protein 3 family
- Bacterial solute-binding protein 5 family
- Bacterial solute-binding protein 8 family
- Beta-lactamase family
- Binding-protein-dependent transport system permease family
- Carbohydrate kinase PfkB family
- Catalase family
- Cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
- Cation transport ATPase (P-type) (TC 3.A.3) family
- CdaR family
- CitM transporter family (TC 2.A.11)
- Class-I aminoacyl-tRNA synthetase family
- Class-II aminoacyl-tRNA synthetase family
- Class I-like SAM-binding methyltransferase superfamily
- Class-I pyridoxal-phosphate-dependent aminotransferase family
- Class-II pyridoxal-phosphate-dependent aminotransferase family
- Class-III pyridoxal-phosphate-dependent aminotransferase family
- Class-IV pyridoxal-phosphate-dependent aminotransferase family
- Class-V pyridoxal-phosphate-dependent aminotransferase family
- Classic translation factor GTPase family
- Cof family
- CotF family
- CysTW subfamily
- Cytidine and deoxycytidylate deaminase family
- Cytochrome P450 family
- Dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family
- DinB family
- DNA polymerase type-Y family
- Drug/metabolite transporter (DMT) superfamily
- EamA transporter family
- ECF subfamily
- EmrB family
- Enoyl-CoA hydratase/isomerase family
- Extradiol ring-cleavage dioxygenase family
- FecCD subfamily
- FGGY kinase family
- Flagella basal body rod proteins family
- FtsA/MreB family
- Fur family
- 'GDSL' lipolytic enzyme family
- GerABKA family
- GerABKC lipoprotein family
- GerPA/GerPF family
- Gfo/Idh/MocA family
- Glycosyl hydrolase 1 family
- Glycosyl hydrolase 4 family
- Glycosyl hydrolase 13 family
- Glycosyl hydrolase 18 family
- Glycosyl hydrolase 43 family
- Glycosyltransferase 1 family
- Glycosyltransferase 2 family
- Glycosyltransferase 4 subfamily
- Glycosyltransferase 51 family
- HAD superfamily
- Helicase family
- Isochorismatase family
- LacI family
- LTA synthase family
- Lyase 1 family
- Major facilitator superfamily
- MalFG subfamily
- Malic enzymes family
- Mandelate racemase/muconate lactonizing enzyme family
- Membrane fusion protein (MFP) (TC 8.A.1) family
- MerR family
- Metallo-beta-lactamase superfamily
- Metallo-dependent hydrolases superfamily
- Metallophosphoesterase superfamily
- Methyltransferase superfamily
- MscS (TC 1.A.23) family
- Multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
- MurCDEF family
- N-acetylmuramoyl-L-alanine amidase 2 family
- N-acetylmuramoyl-L-alanine amidase 3 family
- NAD(P)-dependent epimerase/dehydratase family
- Nitroreductase family
- Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily
- Nudix hydrolases
- OppBC subfamily
- 4-oxalocrotonate tautomerase family
- 2-oxoacid dehydrogenase family
- Peptidase C40 family
- Peptidase C56 family
- Peptidase M16 family
- Peptidase M20 family
- Peptidase M20A family
- Peptidase M50B family
- Peptidase S8 family
- Peptidase S11 family
- Peptidase S26 family
- Peptidase S54 family
- PEP-utilizing enzyme family
- Peroxiredoxin family
- Phage integrase family
- Phr family
- Polysaccharide deacetylase family
- Polysaccharide synthase family
- PRD-containing transcription factors
- Prokaryotic molybdopterin-containing oxidoreductase family
- Protein kinase superfamily
- PSMR family
- Purine/pyrimidine phosphoribosyltransferase family
- Radical SAM superfamily
- RAP family
- S-transferase-like (STL) superfamily
- SEDS proteins
- Ser/Thr protein kinase family
- Short-chain dehydrogenases/reductases (SDR) family
- Sigma-70 factor family
- Site-specific recombinase resolvase family
- Small heat shock protein (Hsp20) family
- Small multidrug resistance (SMR) (TC 2.A.7.1) family
- Sodium:galactoside symporter (TC 2.A.2) family
- Sodium:solute symporter (SSF) (TC 2.A.21) family
- SOS response-associated peptidase family
- Spore germination protein (SGP) (TC 2.A.3.9) family
- SscA family
- Sugar phosphate cyclases superfamily
- Sugar transporter (TC 2.A.1.1) family
- TCR/Tet family
- TerC family
- TetR family
- Thiolase-like superfamily
- Thioredoxin family
- 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family
- TPP enzyme family
- TRAFAC class translation factor GTPase superfamily
- TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily
- Transferase hexapeptide repeat family
- Transpeptidase family
- UPF0053 family
- UPF0702 family
- UPF0714 family
- UPF0750 membrane proteins
- Xanthine/uracil permease family
- Xre family
- Zinc-containing alcohol dehydrogenase family
