Difference between revisions of "GlmS ribozyme"
(Created page with " {{RegulonTable| Regulator=glmS ribozyme }} = Genes in this regulon = === Rna cleavage === * ''glmS''") |
|||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
| − | |||
{{RegulonTable| | {{RegulonTable| | ||
Regulator=[[glmS ribozyme]] | Regulator=[[glmS ribozyme]] | ||
| Line 6: | Line 5: | ||
= Genes in this regulon = | = Genes in this regulon = | ||
| − | === | + | === RNA cleavage === |
* ''[[glmS]]'' | * ''[[glmS]]'' | ||
| + | |||
| + | = [http://www.rcsb.org/pdb/explore/explore.do?structureId=2GCS Structure of the ribozyme] = | ||
| + | |||
| + | =See also:= | ||
| + | * [[RNA switch]] | ||
| + | |||
| + | = Important publications = | ||
| + | <pubmed>24769284, 18079181,16484375,16784238,15096624,16990543,17114942,16484375,15029187,17283212,16298301,19228039,21317896,21395279,24318896,28192411</pubmed> | ||
| + | =Back to [[regulons]]= | ||
Latest revision as of 12:08, 24 February 2017
| Regulator | |
Contents
Genes in this regulon
RNA cleavage
Structure of the ribozyme
See also:
Important publications
Jamie L Bingaman, Sixue Zhang, David R Stevens, Neela H Yennawar, Sharon Hammes-Schiffer, Philip C Bevilacqua
The GlcN6P cofactor plays multiple catalytic roles in the glmS ribozyme.
Nat Chem Biol: 2017, 13(4);439-445
[PubMed:28192411]
[WorldCat.org]
[DOI]
(I p)
Arati Ramesh, Wade C Winkler
Metabolite-binding ribozymes.
Biochim Biophys Acta: 2014, 1839(10);989-994
[PubMed:24769284]
[WorldCat.org]
[DOI]
(P p)
Christina E Lünse, Günter Mayer
Screening assays to identify artificial glmS ribozyme activators.
Methods Mol Biol: 2014, 1103;199-209
[PubMed:24318896]
[WorldCat.org]
[DOI]
(I p)
Krista M Brooks, Ken J Hampel
Rapid steps in the glmS ribozyme catalytic pathway: cation and ligand requirements.
Biochemistry: 2011, 50(13);2424-33
[PubMed:21395279]
[WorldCat.org]
[DOI]
(I p)
Peter Y Watson, Martha J Fedor
The glmS riboswitch integrates signals from activating and inhibitory metabolites in vivo.
Nat Struct Mol Biol: 2011, 18(3);359-63
[PubMed:21317896]
[WorldCat.org]
[DOI]
(I p)
Jesse C Cochrane, Sarah V Lipchock, Kathryn D Smith, Scott A Strobel
Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme.
Biochemistry: 2009, 48(15);3239-46
[PubMed:19228039]
[WorldCat.org]
[DOI]
(I p)
Jennifer A Collins, Irnov Irnov, Stephanie Baker, Wade C Winkler
Mechanism of mRNA destabilization by the glmS ribozyme.
Genes Dev: 2007, 21(24);3356-68
[PubMed:18079181]
[WorldCat.org]
[DOI]
(P p)
Rebecca A Tinsley, Jennifer R W Furchak, Nils G Walter
Trans-acting glmS catalytic riboswitch: locked and loaded.
RNA: 2007, 13(4);468-77
[PubMed:17283212]
[WorldCat.org]
[DOI]
(P p)
Kenneth Blount, Izabela Puskarz, Robert Penchovsky, Ronald Breaker
Development and application of a high-throughput assay for glmS riboswitch activators.
RNA Biol: 2006, 3(2);77-81
[PubMed:17114942]
[WorldCat.org]
[DOI]
(I p)
Daniel J Klein, Adrian R Ferré-D'Amaré
Structural basis of glmS ribozyme activation by glucosamine-6-phosphate.
Science: 2006, 313(5794);1752-6
[PubMed:16990543]
[WorldCat.org]
[DOI]
(I p)
Ken J Hampel, Melissa M Tinsley
Evidence for preorganization of the glmS ribozyme ligand binding pocket.
Biochemistry: 2006, 45(25);7861-71
[PubMed:16784238]
[WorldCat.org]
[DOI]
(P p)
Adam Roth, Ali Nahvi, Mark Lee, Inbal Jona, Ronald R Breaker
Characteristics of the glmS ribozyme suggest only structural roles for divalent metal ions.
RNA: 2006, 12(4);607-19
[PubMed:16484375]
[WorldCat.org]
[DOI]
(P p)
Tom J McCarthy, Melissa A Plog, Shennen A Floy, Joshua A Jansen, Juliane K Soukup, Garrett A Soukup
Ligand requirements for glmS ribozyme self-cleavage.
Chem Biol: 2005, 12(11);1221-6
[PubMed:16298301]
[WorldCat.org]
[DOI]
(P p)
Jeffrey E Barrick, Keith A Corbino, Wade C Winkler, Ali Nahvi, Maumita Mandal, Jennifer Collins, Mark Lee, Adam Roth, Narasimhan Sudarsan, Inbal Jona, J Kenneth Wickiser, Ronald R Breaker
New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control.
Proc Natl Acad Sci U S A: 2004, 101(17);6421-6
[PubMed:15096624]
[WorldCat.org]
[DOI]
(P p)
Wade C Winkler, Ali Nahvi, Adam Roth, Jennifer A Collins, Ronald R Breaker
Control of gene expression by a natural metabolite-responsive ribozyme.
Nature: 2004, 428(6980);281-6
[PubMed:15029187]
[WorldCat.org]
[DOI]
(I p)
