Difference between revisions of "DEAD-box RNA helicases"
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* 3.2.4. [[RNases]] | * 3.2.4. [[RNases]] | ||
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| − | + | [[RNA chaperones]] | |
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==Labs working on DEAD-box RNA helicases== | ==Labs working on DEAD-box RNA helicases== | ||
* [[Dagmar Klostermeier]] | * [[Dagmar Klostermeier]] | ||
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* [[YfmL]] | * [[YfmL]] | ||
| + | Strain GP1063 deleted for all four DEAD-box RNA helicases is available in [[Jörg Stülke]]'s lab (''[[cshA]]''::''aphA3'' ''[[cshB]]''::''cat'' ''[[deaD]]''::''tet'' ''[[yfmL]]''::''ermC''). The individual mutants are available as well. {{PubMed|23175651}} | ||
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| + | == Important original publications == | ||
| + | <pubmed>23175651 12535527 </pubmed> | ||
==Key reviews== | ==Key reviews== | ||
| − | <pubmed>20206133 19747077 16936318 16935882 16337753 14991003 12695678 12110176 </pubmed> | + | <pubmed>20206133 19747077 16936318 16935882 16337753 14991003 12695678 12110176 21378185 21779027 23064154 20709848,21437710, 21705526 26808656 25907111 25579577 25720120</pubmed> |
| + | |||
| + | ==External links== | ||
| + | * [http://www.rnahelicase.org/bacdead.htm The RNA helicase database] | ||
| + | =Back to [[categories]]= | ||
Latest revision as of 11:02, 25 August 2016
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Contents
Labs working on DEAD-box RNA helicases
DEAD-box RNA helicases in B. subtilis
Strain GP1063 deleted for all four DEAD-box RNA helicases is available in Jörg Stülke's lab (cshA::aphA3 cshB::cat deaD::tet yfmL::ermC). The individual mutants are available as well. PubMed
Important original publications
Martin Lehnik-Habrink, Leonie Rempeters, Ákos T Kovács, Christoph Wrede, Claudia Baierlein, Heike Krebber, Oscar P Kuipers, Jörg Stülke
DEAD-Box RNA helicases in Bacillus subtilis have multiple functions and act independently from each other.
J Bacteriol: 2013, 195(3);534-44
[PubMed:23175651]
[WorldCat.org]
[DOI]
(I p)
N Kyle Tanner, Olivier Cordin, Josette Banroques, Monique Doère, Patrick Linder
The Q motif: a newly identified motif in DEAD box helicases may regulate ATP binding and hydrolysis.
Mol Cell: 2003, 11(1);127-38
[PubMed:12535527]
[WorldCat.org]
[DOI]
(P p)
Key reviews
Vanessa Khemici, Patrick Linder
RNA helicases in bacteria.
Curr Opin Microbiol: 2016, 30;58-66
[PubMed:26808656]
[WorldCat.org]
[DOI]
(I p)
Peter Redder, Stéphane Hausmann, Vanessa Khemici, Haleh Yasrebi, Patrick Linder
Bacterial versatility requires DEAD-box RNA helicases.
FEMS Microbiol Rev: 2015, 39(3);392-412
[PubMed:25907111]
[WorldCat.org]
[DOI]
(I p)
Markus G Rudolph, Dagmar Klostermeier
When core competence is not enough: functional interplay of the DEAD-box helicase core with ancillary domains and auxiliary factors in RNA binding and unwinding.
Biol Chem: 2015, 396(8);849-65
[PubMed:25720120]
[WorldCat.org]
[DOI]
(I p)
Patrick Linder, Frances Fuller-Pace
Happy birthday: 25 years of DEAD-box proteins.
Methods Mol Biol: 2015, 1259;17-33
[PubMed:25579577]
[WorldCat.org]
[DOI]
(I p)
Steven W Hardwick, Ben F Luisi
Rarely at rest: RNA helicases and their busy contributions to RNA degradation, regulation and quality control.
RNA Biol: 2013, 10(1);56-70
[PubMed:23064154]
[WorldCat.org]
[DOI]
(I p)
Patrick Linder, Eckhard Jankowsky
From unwinding to clamping - the DEAD box RNA helicase family.
Nat Rev Mol Cell Biol: 2011, 12(8);505-16
[PubMed:21779027]
[WorldCat.org]
[DOI]
(I e)
Franck Pandiani, Stéphanie Chamot, Julien Brillard, Frédéric Carlin, Christophe Nguyen-the, Véronique Broussolle
Role of the five RNA helicases in the adaptive response of Bacillus cereus ATCC 14579 cells to temperature, pH, and oxidative stresses.
Appl Environ Microbiol: 2011, 77(16);5604-9
[PubMed:21705526]
[WorldCat.org]
[DOI]
(I p)
Varinia López-Ramírez, Luis D Alcaraz, Gabriel Moreno-Hagelsieb, Gabriela Olmedo-Álvarez
Phylogenetic distribution and evolutionary history of bacterial DEAD-Box proteins.
J Mol Evol: 2011, 72(4);413-31
[PubMed:21437710]
[WorldCat.org]
[DOI]
(I p)
Xinliang Zhao, Chaitanya Jain
DEAD-box proteins from Escherichia coli exhibit multiple ATP-independent activities.
J Bacteriol: 2011, 193(9);2236-41
[PubMed:21378185]
[WorldCat.org]
[DOI]
(I p)
Franck Pandiani, Julien Brillard, Isabelle Bornard, Caroline Michaud, Stéphanie Chamot, Christophe Nguyen-the, Véronique Broussolle
Differential involvement of the five RNA helicases in adaptation of Bacillus cereus ATCC 14579 to low growth temperatures.
Appl Environ Microbiol: 2010, 76(19);6692-7
[PubMed:20709848]
[WorldCat.org]
[DOI]
(I p)
Eric A Gustafson, Gary M Wessel
DEAD-box helicases: posttranslational regulation and function.
Biochem Biophys Res Commun: 2010, 395(1);1-6
[PubMed:20206133]
[WorldCat.org]
[DOI]
(I p)
Manuel Hilbert, Anne R Karow, Dagmar Klostermeier
The mechanism of ATP-dependent RNA unwinding by DEAD box proteins.
Biol Chem: 2009, 390(12);1237-50
[PubMed:19747077]
[WorldCat.org]
[DOI]
(I p)
Patrick Linder
Dead-box proteins: a family affair--active and passive players in RNP-remodeling.
Nucleic Acids Res: 2006, 34(15);4168-80
[PubMed:16936318]
[WorldCat.org]
[DOI]
(I p)
Frances V Fuller-Pace
DExD/H box RNA helicases: multifunctional proteins with important roles in transcriptional regulation.
Nucleic Acids Res: 2006, 34(15);4206-15
[PubMed:16935882]
[WorldCat.org]
[DOI]
(I p)
Olivier Cordin, Josette Banroques, N Kyle Tanner, Patrick Linder
The DEAD-box protein family of RNA helicases.
Gene: 2006, 367;17-37
[PubMed:16337753]
[WorldCat.org]
[DOI]
(P p)
Sanda Rocak, Patrick Linder
DEAD-box proteins: the driving forces behind RNA metabolism.
Nat Rev Mol Cell Biol: 2004, 5(3);232-41
[PubMed:14991003]
[WorldCat.org]
[DOI]
(P p)
N Kyle Tanner
The newly identified Q motif of DEAD box helicases is involved in adenine recognition.
Cell Cycle: 2003, 2(1);18-9
[PubMed:12695678]
[WorldCat.org]
[DOI]
(P p)
Jon R Lorsch
RNA chaperones exist and DEAD box proteins get a life.
Cell: 2002, 109(7);797-800
[PubMed:12110176]
[WorldCat.org]
[DOI]
(P p)
