Difference between revisions of "ParA"

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m (Jstuelk moved page Soj to ParA: 16677298)
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* '''Description:''' ATPase, centromere-like function involved in forespore chromosome partitioning / negative regulation of sporulation initiation <br/><br/>
+
* '''Description:''' ATPase, centromere-like function involved in forespore chromosome partitioning / negative regulation of [[sporulation]] initiation <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''soj''
+
|''parA''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''parA, spo0JA ''
+
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''soj, spo0JA ''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || negative regulator of sporulation initiation
+
|style="background:#ABCDEF;" align="center"| '''Product''' || negative regulator of [[sporulation]] initiation
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || forespore chromosome partitioning /<br/> negative regulation of sporulation initiation
+
|style="background:#ABCDEF;" align="center"|'''Function''' || forespore chromosome partitioning /<br/> negative regulation of [[sporulation]] initiation
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU40970 soj]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU40970 parA]
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=Soj Soj]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=ParA ParA]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 4.903   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 4.903   
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 759 bp, 253 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 759 bp, 253 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spo0J]]'', ''[[yyaB]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[parB]]'', ''[[yyaB]]''
 
|-
 
|-
 
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU40970 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU40970 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU40970 DNA_with_flanks]
 
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU40970 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU40970 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU40970 DNA_with_flanks]
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* '''Effectors of protein activity:'''  
 
* '''Effectors of protein activity:'''  
** [[Spo0J]] inhibits [[Soj]] dimerization and concomitant DNA-binding activity by stimulating Soj ATPase activity {{PubMed|21235642}}  
+
** [[ParB]] inhibits [[ParA]] dimerization and concomitant DNA-binding activity by stimulating [[ParA]] ATPase activity {{PubMed|21235642}}  
  
 
* '''[[SubtInteract|Interactions]]:'''
 
* '''[[SubtInteract|Interactions]]:'''
** [[Spo0J]]-[[Soj]] {{PubMed|21235642}}  
+
** [[ParA]]-[[ParB]] {{PubMed|21235642}}  
** [[Soj]]-[[DnaA]] {{PubMed|22286949}}  
+
** [[ParA]]-[[DnaA]] {{PubMed|22286949}}  
  
 
* '''[[Localization]]:'''
 
* '''[[Localization]]:'''
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=Expression and regulation=
 
=Expression and regulation=
* '''Operon:''' ''[[soj]]-[[spo0J]]'' {{PubMed|22383849}}
+
* '''Operon:''' ''[[parA]]-[[parB]]'' {{PubMed|22383849}}
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=parA_4206397_4207158_-1 soj] {{PubMed|22383849}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=parA_4206397_4207158_-1 parA] {{PubMed|22383849}}
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  

Revision as of 08:06, 10 August 2015

  • Description: ATPase, centromere-like function involved in forespore chromosome partitioning / negative regulation of sporulation initiation

Gene name parA
Synonyms soj, spo0JA
Essential no
Product negative regulator of sporulation initiation
Function forespore chromosome partitioning /
negative regulation of sporulation initiation
Gene expression levels in SubtiExpress: parA
Interactions involving this protein in SubtInteract: ParA
MW, pI 27 kDa, 4.903
Gene length, protein length 759 bp, 253 aa
Immediate neighbours parB, yyaB
Sequences Protein DNA DNA_with_flanks
Genetic context
Soj context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
Soj expression.png















Categories containing this gene/protein

DNA condensation/ segregation, sporulation/ other, membrane proteins

This gene is a member of the following regulons

Spo0A regulon

The gene

Basic information

  • Locus tag: BSU40970

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Protein family: parA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
    • ParB inhibits ParA dimerization and concomitant DNA-binding activity by stimulating ParA ATPase activity PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 84 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 280 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original publications