ywdK

168

unknown

Locus: BSU_37930

Molecular weight: 11.89 kDa

Isoelectric point: 9.43

Protein length: 123 aa

Gene length: 372 bp

Function: unknown

Product: unknown

Essential: no

E.C.: null

Synonyms: ywdK, ipa-61d

Genomic Context

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Categories containing this gene/protein

Groups of genes, Membrane proteins

List of homologs in different organisms, belongs to COG2363 (Galperin et al., 2021)

This gene is a member of the following regulons

TnrA regulon

Gene

Coordinates: 3,894,030  3,894,401

The protein

Protein family

UPF0382 family (single member, according to UniProt)

Structure

P39619 (AlphaFold)

Localization

cell membrane (according to UniProt)

Expression and Regulation

Operons

Genes: ywdI-ywdJ-ywdK

Description: PubMed

Regulation

repressed in the absence of good nitrogen sources (glutamine or ammonium) (TnrA) PubMed

Regulatory mechanism

TnrA: repression, PubMed, in tnrA regulon

Biological materials

Mutant

MGNA-B237 (ywdK::erm), available at the NBRP B. subtilis, Japan
BKE37930 (ywdK::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCTATCTCTCCCGCCTTT,  downstream forward: _UP4_TAAACAAAAAAGCCAATCCT
BKK37930 (ywdK::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCTATCTCTCCCGCCTTT,  downstream forward: _UP4_TAAACAAAAAAGCCAATCCT

References

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