Difference between revisions of "RecJ"
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* '''Operon:''' ''[[recJ]]-[[apt]]'' {{PubMed|15241682}} | * '''Operon:''' ''[[recJ]]-[[apt]]'' {{PubMed|15241682}} | ||
− | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=recJ_2823419_2825779_-1 | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=recJ_2823419_2825779_-1 recJ] {{PubMed|22383849}} |
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' |
Revision as of 11:07, 7 July 2015
- Description: single-strand DNA-specific exonuclease
Gene name | recJ |
Synonyms | yrvE |
Essential | no |
Product | single-strand DNA-specific exonuclease |
Function | DNA repair |
Gene expression levels in SubtiExpress: recJ | |
Interactions involving this protein in SubtInteract: RecJ | |
Metabolic function and regulation of this protein in SubtiPathways: recJ | |
MW, pI | 87 kDa, 5.181 |
Gene length, protein length | 2358 bp, 786 aa |
Immediate neighbours | apt, yrvD |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
stringent response, Efp-dependent proteins
The gene
Basic information
- Locus tag: BSU27620
Phenotypes of a mutant
Database entries
- BsubCyc: BSU27620
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: recJ family (according to Swiss-Prot)
- Paralogous protein(s): YorK
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU27620
- Structure:
- UniProt: O32044
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
- translation is likely to require Efp due to the presence of several consecutive proline residues PubMed
Biological materials
- Mutant:
- GP895 (recJ::kan), available in Jörg Stülke's lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Original publications