Difference between revisions of "YciB"
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 582 bp, 194 aa | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 582 bp, 194 aa | ||
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| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[folE2]]'', ''[[yczL]]'' |
|- | |- | ||
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03350 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03350 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03350 DNA_with_flanks] | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03350 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03350 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03350 DNA_with_flanks] | ||
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=== Additional information=== | === Additional information=== | ||
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[ | + | * '''Operon:''' ''[[folE2]]-[[yciB]]-[[yciC]]'' {{PubMed|9811636}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yciB_365170_365754_1 yciB] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yciB_365170_365754_1 yciB] {{PubMed|22383849}} | ||
Revision as of 15:50, 6 February 2015
- Description: zinc transporter
| Gene name | yciB |
| Synonyms | |
| Essential | no |
| Product | zinc transporter |
| Function | zinc uptake |
| Gene expression levels in SubtiExpress: yciB | |
| Metabolic function and regulation of this protein in SubtiPathways: yciB | |
| MW, pI | 21 kDa, 6.18 |
| Gene length, protein length | 582 bp, 194 aa |
| Immediate neighbours | folE2, yczL |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transporters/ other, trace metal homeostasis (Cu, Zn, Ni, Mn, Mo), membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03350
Phenotypes of a mutant
Database entries
- BsubCyc: BSU03350
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: lipoprotein, cell membrane at the cell poles PubMed
Database entries
- BsubCyc: BSU03350
- Structure:
- UniProt: C0SP99
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Marc Bramkamp
The putative Bacillus subtilis L,D-transpeptidase YciB is a lipoprotein that localizes to the cell poles in a divisome-dependent manner.
Arch Microbiol: 2010, 192(1);57-68
[PubMed:20013255]
[WorldCat.org]
[DOI]
(I p)
Ahmed Gaballa, Tao Wang, Rick W Ye, John D Helmann
Functional analysis of the Bacillus subtilis Zur regulon.
J Bacteriol: 2002, 184(23);6508-14
[PubMed:12426338]
[WorldCat.org]
[DOI]
(P p)
A Gaballa, J D Helmann
Identification of a zinc-specific metalloregulatory protein, Zur, controlling zinc transport operons in Bacillus subtilis.
J Bacteriol: 1998, 180(22);5815-21
[PubMed:9811636]
[WorldCat.org]
[DOI]
(P p)
