Difference between revisions of "YotH"
| Line 105: | Line 105: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[yosX]]-[[yotB]]-[[yotC]]-[[yotD]]-[[yotE]]-[[yotF]]-[[yotG]]-[[yotH]]-[[yotI]]-[[yotJ]]-[[yotK]]-[[yotM]]-[[sprB]]'' {{PubMed|25299644}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yotH_2154077_2154250_-1 yotH] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yotH_2154077_2154250_-1 yotH] {{PubMed|22383849}} | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
| + | ** [[SigA]] {{PubMed|25299644}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** induced by MMC addition to vegetative cells {{PubMed|25299644}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 136: | Line 138: | ||
=References= | =References= | ||
| − | + | <pubmed>,9387222, 25299644</pubmed> | |
| − | <pubmed>,9387222, </pubmed> | ||
| − | |||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 09:17, 10 October 2014
- Description: similar to propionyl-CoA carboxylase
| Gene name | yotH |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: yotH | |
| MW, pI | 6 kDa, 5.386 |
| Gene length, protein length | 171 bp, 57 aa |
| Immediate neighbours | yotI, yotG |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
SP-beta prophage, poorly characterized/ putative enzymes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU19880
Phenotypes of a mutant
Database entries
- BsubCyc: BSU19880
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU19880
- Structure:
- UniProt: O31867
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- induced by MMC addition to vegetative cells PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Kimihiro Abe, Yuta Kawano, Keito Iwamoto, Kenji Arai, Yuki Maruyama, Patrick Eichenberger, Tsutomu Sato
Developmentally-regulated excision of the SPβ prophage reconstitutes a gene required for spore envelope maturation in Bacillus subtilis.
PLoS Genet: 2014, 10(10);e1004636
[PubMed:25299644]
[WorldCat.org]
[DOI]
(I e)
Valentina Tosato, Alessandra M Albertini, Michela Zotti, Sabrina Sonda, Carlo V Bruschi
Sequence completion, identification and definition of the fengycin operon in Bacillus subtilis 168.
Microbiology (Reading): 1997, 143 ( Pt 11);3443-3450
[PubMed:9387222]
[WorldCat.org]
[DOI]
(P p)
