ydhC

168

similar to transcriptional regulator (GntR family)

Locus: BSU_05700

Molecular weight: 26.25 kDa

Isoelectric point: 5.79

Protein length: 224 aa

Gene length: 675 bp

Function: unknown

Product: transcriptional regulator (GntR family)

Essential: no

Synonyms: ydhC

Genomic Context

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List of homologs in different organisms, belongs to COG1802 (Galperin et al., 2021)

Gene

Coordinates: 615,871 → 616,545

The protein

Protein family

• GntR family of transcription factors

Domains

• HTH gntR-type domain (aa 10-77) (according to UniProt)

Structure

• 6AZ6 (PDB) (GntR from Streptococcus agalactiae, 30% identity) PubMed
• O05494 (AlphaFold)

Expression and Regulation

Operons

• Genes: ydhC

  Description: PubMed

Biological materials

Mutant

• MGNA-C178 (ydhC::erm), available at the NBRP B. subtilis, Japan
• BKE05700 (ΔydhC::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATATATAATACCTCTTTTG,  downstream forward: _UP4_TGATTTGTATGATCCGGTAC
• BKK05700 (ΔydhC::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATATATAATACCTCTTTTG,  downstream forward: _UP4_TGATTTGTATGATCCGGTAC

References

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