Difference between revisions of "RhiL"

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m (Jstuelk moved page YesO to RhiL: 24391637)
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|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''yesO''
+
|''rhiL''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
+
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' yesO''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU06970 yesO]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU06970 rhiL]
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=YesO YesO]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=YesO rhiL]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 46 kDa, 4.992   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 46 kDa, 4.992   
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1236 bp, 412 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1236 bp, 412 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yesN]]'', ''[[yesP]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yesN]]'', ''[[rhiF]]''
 
|-
 
|-
 
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU06970 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU06970 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU06970 DNA_with_flanks]
 
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU06970 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU06970 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU06970 DNA_with_flanks]
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* '''[[SubtInteract|Interactions]]:'''
 
* '''[[SubtInteract|Interactions]]:'''
** ([[YesP]]-[[YesQ]])-[[YesO]] {{PubMed|10092453}}
+
** ([[RhiL]]-[[RhiF]])-[[RhiG]] {{PubMed|10092453}}
  
 
* '''[[Localization]]:'''  
 
* '''[[Localization]]:'''  
** associated to the membrane (via [[YesP]]-[[YesQ]]) {{PubMed|10092453}}
+
** associated to the membrane (via [[RhiF]]-[[RhiG]]) {{PubMed|10092453}}
  
 
=== Database entries ===
 
=== Database entries ===
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* '''Operon:'''  
 
* '''Operon:'''  
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yesO_761662_762945_1 yesO] {{PubMed|22383849}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yesO_761662_762945_1 rhiL] {{PubMed|22383849}}
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  

Revision as of 15:33, 7 June 2014

Gene name rhiL
Synonyms yesO
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: rhiL
Interactions involving this protein in SubtInteract: rhiL
MW, pI 46 kDa, 4.992
Gene length, protein length 1236 bp, 412 aa
Immediate neighbours yesN, rhiF
Sequences Protein DNA DNA_with_flanks
Genetic context
YesO context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YesO expression.png















Categories containing this gene/protein

ABC transporters, utilization of specific carbon sources, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU06970

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: bacterial solute-binding protein 1 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References