Difference between revisions of "RhaM"
| Line 38: | Line 38: | ||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| − | {{SubtiWiki category|[[ | + | {{SubtiWiki category|[[utilization of specific carbon sources]]}} |
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| Line 82: | Line 82: | ||
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' | + | * '''[[SubtInteract|Interactions]]:''' |
| − | * '''Localization:''' cytoplasm (according to Swiss-Prot) | + | * '''[[Localization]]:''' |
| + | ** cytoplasm (according to Swiss-Prot) | ||
=== Database entries === | === Database entries === | ||
| Line 102: | Line 103: | ||
* '''Operon:''' | * '''Operon:''' | ||
| + | ** ''[[rhaEW]]-[[rhaR]]-[[rhaB]]-[[rhaM]]-[[rhaA]]'' {{PubMed|22383849}} | ||
| + | ** ''[[rhaR]]-[[rhaB]]-[[rhaM]]-[[rhaA]]'' {{PubMed|22383849}} | ||
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yulD_3199233_3199547_-1 yulD] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yulD_3199233_3199547_-1 yulD] {{PubMed|22383849}} | ||
| Line 132: | Line 135: | ||
=References= | =References= | ||
| − | <pubmed>24391637 </pubmed> | + | <pubmed>24391637 22383849</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 15:06, 7 June 2014
- Description: mutarotase involved in rhamnose utilization
| Gene name | yulD |
| Synonyms | |
| Essential | no |
| Product | mutarotase |
| Function | utilization of rhamnose |
| Gene expression levels in SubtiExpress: yulD | |
| MW, pI | 12 kDa, 5.184 |
| Gene length, protein length | 312 bp, 104 aa |
| Immediate neighbours | yulE, yulC |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
utilization of specific carbon sources
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU31190
Phenotypes of a mutant
Database entries
- BsubCyc: BSU31190
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Alpha-L-rhamnose = beta-L-rhamnose (according to Swiss-Prot)
- Protein family: rhamnose mutarotase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU31190
- Structure:
- UniProt: O05263
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
