Difference between revisions of "RacE"

From SubtiWiki
Jump to: navigation, search
Line 123: Line 123:
  
 
* '''Additional information:'''
 
* '''Additional information:'''
 +
** number of protein molecules per cell (complex medium with amino acids, without glucose): 531 {{PubMed|24696501}}
  
 
=Biological materials =
 
=Biological materials =

Revision as of 10:09, 17 April 2014

  • Description: glutamate racemase

Gene name racE
Synonyms glr
Essential yes PubMed
Product glutamate racemase
Function peptidoglycan precursor biosynthesis
Gene expression levels in SubtiExpress: racE
Metabolic function and regulation of this protein in SubtiPathways:
racE
MW, pI 29 kDa, 4.858
Gene length, protein length 816 bp, 272 aa
Immediate neighbours gerM, ysmB
Sequences Protein DNA DNA_with_flanks
Genetic context
RacE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RacE expression.png















Categories containing this gene/protein

cell wall synthesis, biosynthesis of cell wall components, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU28390

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: L-glutamate = D-glutamate (according to Swiss-Prot)
  • Protein family: aspartate/glutamate racemases family (according to Swiss-Prot)
  • Paralogous protein(s): YrpC

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1ZUW (with D-glutamate)
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 531 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References