YtpR

• Description: similar to Phe-tRNA synthetase (beta subunit)
  
  

Gene name	ytpR
Synonyms
Essential	no
Product	unknown
Function	unknown
Gene expression levels in SubtiExpress: ytpR
MW, pI	21 kDa, 4.266
Gene length, protein length	603 bp, 201 aa
Immediate neighbours	sftA, ytpQ
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed 500px

Categories containing this gene/protein

translation

This gene is a member of the following regulons

Spx regulon

The gene

Basic information

• Locus tag: BSU29820

Database entries

• BsubCyc: BSU29820

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• BsubCyc: BSU29820

• Structure:

• UniProt: O34943

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon: ytpP-ytpQ-ytpR PubMed

• Expression browser: ytpR PubMed

• Sigma factor: SigA PubMed

• Regulation:

• Regulatory mechanism:
  • Spx: transcription activation PubMed

• Additional information:
  • number of protein molecules per cell (minimal medium with glucose and ammonium): 715 PubMed
  • number of protein molecules per cell (complex medium with amino acids, without glucose): 2705 PubMed

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Peter Zuber, Shefali Chauhan, Praseeda Pilaka, Michiko M Nakano, Sairam Gurumoorthy, Ann A Lin, Skye M Barendt, Bui Khanh Chi, Haike Antelmann, Ulrike Mäder
Phenotype enhancement screen of a regulatory spx mutant unveils a role for the ytpQ gene in the control of iron homeostasis.
PLoS One: 2011, 6(9);e25066
[PubMed:21949854] [WorldCat.org] [DOI] (I p)