YpfD

• Description: similar to ribosomal protein S1
  
  

Gene name	ypfD
Synonyms	jofD
Essential	no
Product	unknown
Function	unknown
Gene expression levels in SubtiExpress: ypfD
MW, pI	42 kDa, 4.569
Gene length, protein length	1146 bp, 382 aa
Immediate neighbours	fni, cmk
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

translation, phosphoproteins, most abundant proteins

The gene

Basic information

• Locus tag: BSU22880

Database entries

• BsubCyc: BSU22880

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: ribosomal protein S1P family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification: phosphorylation on Ser-243 PubMed

• Cofactors:

• Effectors of protein activity:

• Interactions:

• Localization: cytoplasm (according to Swiss-Prot)

Database entries

• BsubCyc: BSU22880

• Structure:

• UniProt: P38494

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:

• Expression browser: ypfD PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:
  • The mRNA has a long 5' leader region. This may indicate RNA-based regulation PubMed
  • belongs to the 100 most abundant proteins PubMed
  • number of protein molecules per cell (minimal medium with glucose and ammonium): 13625 PubMed
  • number of protein molecules per cell (complex medium with amino acids, without glucose): 30464 PubMed

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody: