Difference between revisions of "BsrH"

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|style="background:#ABCDEF;" align="center"| '''Gene length''' ||  bp
 
|style="background:#ABCDEF;" align="center"| '''Gene length''' ||  bp
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ratA]]'', ''[[yqbM]]''
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ratA]]'', ''[[as-bsrH]]''
 
|-
 
|-
 
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE.txt    Gene sequence      (+200bp)  ]'''  
 
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE.txt    Gene sequence      (+200bp)  ]'''  
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<br/><br/><br/><br/><br/>
 
<br/><br/><br/><br/><br/>
 +
= [[Categories]] containing this gene/protein =
 +
{{SubtiWiki category|[[toxins, antitoxins and immunity against toxins]]}},
 +
{{SubtiWiki category|[[Skin element]]}},
 +
{{SubtiWiki category|[[ncRNA]]}}
 +
 +
= This gene is a member of the following [[regulons]] =
 +
{{SubtiWiki regulon|[[as-bsrH regulon]]}}
 +
 
=The gene=
 
=The gene=
  
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=?&redirect=T ?]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
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=== Additional information===
 
=== Additional information===
 +
 +
  
  
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=References=
 
=References=
  
<pubmed>18948176, </pubmed>
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<pubmed>18948176, 20525796</pubmed>
# Saito S, Kakeshita H, Nakamura K (2009) Novel small RNA-encoding genes in the intergenic regions of ''Bacillus subtilis''. ''Gene'' '''428:''' 2-8. [http://www.ncbi.nlm.nih.gov/sites/entrez/18948176 PubMed]
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 +
[[Category:small RNA]]

Latest revision as of 15:23, 2 April 2014

  • Description: small RNA

Gene name bsrH
Synonyms
Essential no
Product small RNA
Function unknown
Gene length bp
Immediate neighbours ratA, as-bsrH
Gene sequence (+200bp)
Genetic context
File:GenE context.gif








Categories containing this gene/protein

toxins, antitoxins and immunity against toxins, Skin element, ncRNA

This gene is a member of the following regulons

as-bsrH regulon

The gene

Basic information

  • Locus tag:

Phenotypes of a mutant

Database entries

  • BsubCyc: ?
  • DBTBS entry: no entry
  • SubtiList entry: no entry
  • Structure:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:


Labs working on this gene/RNA

Kouji Nakamura, Tsukuba, University, Japan

Your additional remarks

References

Irnov Irnov, Cynthia M Sharma, Jörg Vogel, Wade C Winkler
Identification of regulatory RNAs in Bacillus subtilis.
Nucleic Acids Res: 2010, 38(19);6637-51
[PubMed:20525796] [WorldCat.org] [DOI] (I p)

Shinichi Saito, Hiroshi Kakeshita, Kouji Nakamura
Novel small RNA-encoding genes in the intergenic regions of Bacillus subtilis.
Gene: 2009, 428(1-2);2-8
[PubMed:18948176] [WorldCat.org] [DOI] (P p)