Difference between revisions of "YxdJ"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39660&redirect=T BSU39660] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yxdJK.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yxdJK.html] | ||
| Line 99: | Line 100: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39660&redirect=T BSU39660] | ||
* '''Structure:''' | * '''Structure:''' | ||
Revision as of 15:13, 2 April 2014
- Description: two-component response regulator, regulation of the ABC transporter YxdL-YxdM in response to the cationic antimicrobial peptide, LL-37
| Gene name | yxdJ |
| Synonyms | |
| Essential | no |
| Product | two-component response regulator |
| Function | resistance against toxic peptides |
| Gene expression levels in SubtiExpress: yxdJ | |
| Interactions involving this protein in SubtInteract: YxdJ | |
| MW, pI | 26 kDa, 4.937 |
| Gene length, protein length | 687 bp, 229 aa |
| Immediate neighbours | yxdK, iolJ |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
transcription factors and their control, resistance against toxins/ antibiotics, phosphoproteins
This gene is a member of the following regulons
The YxdJ regulon:
The gene
Basic information
- Locus tag: BSU39660
Phenotypes of a mutant
Database entries
- BsubCyc: BSU39660
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylated by YxdK on an Asp residue
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU39660
- Structure:
- UniProt: P42421
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
