ywqM

168

similar to transcriptional regulator ([wiki|LysR family])

locus: BSU_36160

Molecular weight: 33.02 kDa

pI: 5.57

Protein length: 293 aa

Gene length: 882 bp

function: unknown

product: transcriptional regulator ([wiki|LysR family])

essential: no

synonyms: ywqM

List of homologs in different organisms, belongs to COG0583 (Galperin et al., 2021)

Gene

Coordinates: 3,723,454 → 3,724,335

The protein

Protein family

• [wiki|LysR family] (according to UniProt)

[wiki|Domains]

• [wiki|HTH lysR-type domain] (aa 1-58) (according to UniProt)

Structure

• [PDB|5Y2V] (from Synechocystis PCC6803, 29% identity) [pubmed|29279392]
• [AF|P96725]

Expression and Regulation

Operons

• genes: [gene|B6CC41A844FDF1DBCB899447F35E006BC94B064B|ywqM]

  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-A567 (ywqM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/567 NBRP B. subtilis, Japan]
• BKE36160 (Δ[gene|B6CC41A844FDF1DBCB899447F35E006BC94B064B|ywqM]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE36160 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CACTTGTTCTCTTCCTTTCT,  downstream forward: _UP4_TAAAACCTCTCCACAAGGAC
• BKK36160 (Δ[gene|B6CC41A844FDF1DBCB899447F35E006BC94B064B|ywqM]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK36160 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CACTTGTTCTCTTCCTTTCT,  downstream forward: _UP4_TAAAACCTCTCCACAAGGAC

References

Research papers

• 29279392