Difference between revisions of "YtcG"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU29000&redirect=T BSU29000]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ytcG.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ytcG.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU29000&redirect=T BSU29000]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 14:29, 2 April 2014

  • Description: putative negative regulator of transcription of ribonucleotide reductase nrd genes and operons

Gene name ytcG
Synonyms nrdR
Essential no
Product putative regulator protein
Function unknown
Gene expression levels in SubtiExpress: ytcG
MW, pI 17 kDa, 8.05
Gene length, protein length 456 bp, 152 aa
Immediate neighbours dnaB, speD
Sequences Protein DNA DNA_with_flanks
Genetic context
YtcG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtcG expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU29000

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: nrdR family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Inna Grinberg, Tanya Shteinberg, Batia Gorovitz, Yair Aharonowitz, Gerald Cohen, Ilya Borovok
The Streptomyces NrdR transcriptional regulator is a Zn ribbon/ATP cone protein that binds to the promoter regions of class Ia and class II ribonucleotide reductase operons.
J Bacteriol: 2006, 188(21);7635-44
[PubMed:16950922] [WorldCat.org] [DOI] (P p)

Alia Lapidus, Nathalie Galleron, Alexei Sorokin, S Dusko Ehrlich
Sequencing and functional annotation of the Bacillus subtilis genes in the 200 kb rrnB-dnaB region.
Microbiology (Reading): 1997, 143 ( Pt 11);3431-3441
[PubMed:9387221] [WorldCat.org] [DOI] (P p)