yshE

168

unknown

locus: BSU_28570

Molecular weight: 14.87 kDa

pI: 4.46

Protein length: 134 aa

Gene length: 405 bp

function: unknown

product: unknown

essential: no

ec: null

synonyms: yshE

List of homologs in different organisms, belongs to COG3766 (Galperin et al., 2021)

Gene

Coordinates: 2,920,517  2,920,921

The protein

Protein family

• UPF0719 family (single member, according to UniProt)

Structure

• [AF|P94546]

Expression and Regulation

Operons

• genes: [gene|EAD44AA7D72510B70308FD0C9F159DBEDAEBBB74|zapA]-[gene|93726C423313C653C4F71CB107FA12F686959E41|yshB]-[gene|D3954F2BCF6CE66505E4F48FCB4A61EE8D24F6D3|polX]-[gene|F8E82D9AE514B31892FE4530532691274ADA682B|rqcU]-[gene|18CEF3F1EE2E95A009699DE370CBB44F025B7B40|yshE]

  description: [Pubmed|22383849]

  regulation

  • constitutively expressed [Pubmed|23701187]

• genes: [gene|18CEF3F1EE2E95A009699DE370CBB44F025B7B40|yshE]

  description: [Pubmed|8969504]

  additional information

  • the mRNA is very stable (half-life > 15 min) [http://www.ncbi.nlm.nih.gov/sites/entrez/12884008 PubMed]

Biological materials

Mutant

• MGNA-A990 (yshE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/990 NBRP B. subtilis, Japan]
• BKE28570 ([gene|18CEF3F1EE2E95A009699DE370CBB44F025B7B40|yshE]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE28570 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_ATCACTCATGGCCATACTCC,  downstream forward: _UP4_TAAGGGGACGGAGAATAGAT
• BKK28570 ([gene|18CEF3F1EE2E95A009699DE370CBB44F025B7B40|yshE]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK28570 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_ATCACTCATGGCCATACTCC,  downstream forward: _UP4_TAAGGGGACGGAGAATAGAT

References

• 12884008,8969504