Difference between revisions of "SodA"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU25020&redirect=T BSU25020]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU25020&redirect=T BSU25020]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2RCV 2RCV]
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2RCV 2RCV]

Revision as of 14:14, 2 April 2014

  • Description: superoxide dismutase, general stress protein, important for survival of ethanol and paraquat stresses and at low temperatures

Gene name sodA
Synonyms yqgD
Essential no
Product superoxide dismutase
Function detoxification of oxygen radicals
Gene expression levels in SubtiExpress: sodA
MW, pI 22 kDa, 5.203
Gene length, protein length 606 bp, 202 aa
Immediate neighbours yqgE, yqgC
Sequences Protein DNA DNA_with_flanks
Genetic context
SodA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SodA expression.png















Categories containing this gene/protein

general stress proteins (controlled by SigB), resistance against oxidative and electrophile stress, membrane proteins, phosphoproteins, most abundant proteins

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU25020

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 2 superoxide + 2 H+ = O2 + H2O2 (according to Swiss-Prot)
  • Protein family: iron/manganese superoxide dismutase family (according to Swiss-Prot)
  • Paralogous protein(s): SodF

Extended information on the protein

  • Kinetic information:
  • Modification: phosphorylation on Thr-34 AND Thr-70 PubMed
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References