Difference between revisions of "SpoVAD"
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=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23410&redirect=T BSU23410] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/spoVAABCDEF-lysA.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/spoVAABCDEF-lysA.html] | ||
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=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23410&redirect=T BSU23410] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3LM6 3LM6] | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3LM6 3LM6] |
Revision as of 14:07, 2 April 2014
- Description: essential for the uptake of the 1:1 chelate of pyridine-2,6-dicarboxylic acid (DPA(2,6)) and Ca(2+) into developing spores, likely germination protein
Gene name | spoVAD |
Synonyms | |
Essential | no |
Product | binding protein for DPA |
Function | likely germination protein |
Gene expression levels in SubtiExpress: spoVAD | |
Metabolic function and regulation of this protein in SubtiPathways: spoVAD | |
MW, pI | 35 kDa, 5.243 |
Gene length, protein length | 1014 bp, 338 aa |
Immediate neighbours | spoVAEB, spoVAC |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
germination, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU23410
Phenotypes of a mutant
Database entries
- BsubCyc: BSU23410
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- maybe involved in spore germination PubMed
- binding of both DPA(2,6) and Ca(2+)-DPA(2,6) PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- outer surface of the inner spore membrane PubMed
Database entries
- BsubCyc: BSU23410
- Structure: 3LM6
- UniProt: P40869
- KEGG entry: [3]
- E.C. number:
Additional information
- 6,500 molecules are present per spore PubMed
Expression and regulation
- Additional information:
- 6,500 molecules are present per spore PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
- Peter Setlow, University of Connecticut Health Center, USA
Your additional remarks
References