yodQ

168

putative deacylase

Locus: BSU_19710

Molecular weight: 48.39 kDa

Isoelectric point: 5.41

Protein length: 436 aa

Gene length: 1311 bp

Function: unknown

Product: putative deacylase

Essential: no

Synonyms: yodQ, argE

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG0624 (Galperin et al., 2021)

Gene

Coordinates: 2,141,703  2,143,013

The protein

Protein family

• peptidase M20A family (according to UniProt)

Structure

• 3PFO (PDB) (from Rhodopseudomonas Palustris 37% identity)
• O34984 (AlphaFold)

Paralogous protein(s)

• YlmB

Expression and Regulation

Operons

• Genes: yodT-yodS-yodR-yodQ-yodP-kamA-yokU-yozE

  Description: PubMed

  Regulation

  • expressed early during sporuation in the mother cell (SigE) PubMed

  Sigma factors

  • SigE: sigma factor, PubMed, in sigE regulon

Biological materials

Mutant

• BKE19710 (yodQ::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_GTCTTGCATCCTCATTCCCC,  downstream forward: _UP4_CTTCATACAGATGGGGAGGA
• BKK19710 (yodQ::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_GTCTTGCATCCTCATTCCCC,  downstream forward: _UP4_CTTCATACAGATGGGGAGGA

References

Loading