Difference between revisions of "YocK"

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(Basic information/ Evolution)
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU19240&redirect=T BSU19240]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yocK.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yocK.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU19240&redirect=T BSU19240]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 13:54, 2 April 2014

  • Description: general stress protein

Gene name yocK
Synonyms
Essential no
Product general stress protein
Function survival of ethanol stress
Gene expression levels in SubtiExpress: yocK
MW, pI 23 kDa, 4.701
Gene length, protein length 627 bp, 209 aa
Immediate neighbours azoR1, yocL
Sequences Protein DNA DNA_with_flanks
Genetic context
YocK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YocK expression.png















Categories containing this gene/protein

general stress proteins (controlled by SigB)

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU19240

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: azoreductase type 1 family (according to Swiss-Prot)

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

Anja Petersohn, Haike Antelmann, Ulf Gerth, Michael Hecker
Identification and transcriptional analysis of new members of the sigmaB regulon in Bacillus subtilis.
Microbiology (Reading): 1999, 145 ( Pt 4);869-880
[PubMed:10220166] [WorldCat.org] [DOI] (P p)