xynD

xynD
168

arabinoxylan arabinofuranohydrolase

Locus
BSU_18160
Molecular weight
54.33 kDa
Isoelectric point
8.03
Protein length
Gene length
Function
arabinoxylan degradation
Product
arabinoxylan arabinofuranohydrolase
Essential
no
E.C.
3.2.1.55
Synonyms
xynD

Genomic Context

List of homologs in different organisms, belongs to COG3507 (Galperin et al., 2021)

This gene is a member of the following regulons

AbrB regulon

Gene
Coordinates
1,944,113  1,945,654
The protein
Catalyzed reaction/ biological activity
Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides (according to UniProt)
Protein family
glycosyl hydrolase 43 family (according to UniProt)
CBM6 domain (aa 382-511) (accordig to UniProt)
Structure
extracellular (signal peptide) PubMed
Expression and Regulation
Operons
Genes
Description
Regulatory mechanism
AbrB: repression, PubMed, in abrB regulon
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xynDxynC

2025-08-05 04:41:50

ghost

100

179840ced7890abaa560fcb50f8da015378141c8

F409E4A43C7A24F2BBD3C1E0B4EDB68D10C30B23

Biological materials
Mutant
BKE18160 (xynD::erm  trpC2) available at BGSCPubMed, upstream reverse: _UP1_CATCACTTCACATCCTCCTT,  downstream forward: _UP4_TAGTACTCGTAATGGGACCG
BKK18160 (xynD::kan  trpC2) available at BGSCPubMed, upstream reverse: _UP1_CATCACTTCACATCCTCCTT,  downstream forward: _UP4_TAGTACTCGTAATGGGACCG
References
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Page visits: 3614

Time of last update: 2025-08-11 00:51:03

Author of last update: Melvin.boenninger