ynbB

ynbB
168

putative C-S lyase, required for Efp modification

Locus
BSU_17440
Molecular weight
45.91 kDa
Isoelectric point
5.09
Protein length
Gene length
Function
modification of Efp
Product
putative C-S lyase
Essential
no
Synonyms
ynbB

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG4100 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,876,584  1,877,849
Phenotypes of a mutant
inactivation suppresses the swarming defect of a ymfI mutant PubMed
defective in Swarming motility PubMed
The protein
PLP (according to UniProt)
Structure
3JZL (PDB) (from Listeria monocytogenes str. 4b f2365, 67% identity, 80% similarity) PubMed, 3HT4 (from Bacillus Cereus, 99% indentity)
Expression and Regulation
Operons
Description
Regulation
the mRNA is processed between glnR and glnA by RNase Y, this requires the RicA-RicF-RicT complex PubMed
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ynbAglnA

2024-11-13 06:01:34

Jstuelk

99

d45811f6bc7bef80a041d78aaa209f36dccdee6a

2408FECBCAE7255480B230470AF58DDA9F084F5A

Biological materials
Mutant
MGNA-B092 (ynbB::erm), available at the NBRP B. subtilis, Japan
BKE17440 (ynbB::erm  trpC2) available at BGSCPubMed, upstream reverse: _UP1_AAACATGTCTTTATATTTCC,  downstream forward: _UP4_TAAATTTTTTAAAAATTTCT
BKK17440 (ynbB::kan  trpC2) available at BGSCPubMed, upstream reverse: _UP1_AAACATGTCTTTATATTTCC,  downstream forward: _UP4_TAAATTTTTTAAAAATTTCT
References
Research papers
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Time of last update: 2024-11-27 21:29:30

Author of last update: Jstuelk