swsB

168

similar to deacetylase, required for efficient degradation of the spore cortex by CwlJ during germination

Locus: BSU_16700

Molecular weight: 36.31 kDa

Isoelectric point: 9.36

Protein length: 319 aa

Gene length: 960 bp

Function: required for spore cortex degradation during germination

Product: unknown

Essential: no

Synonyms: swsB, ylxY, ymxI

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG0726 (Galperin et al., 2021)

Gene

Coordinates: 1,741,618  1,742,577

The protein

Protein family

• polysaccharide deacetylase family (according to UniProt)

Domains

• NodB homology domain (aa 130-306) (according to UniProt)

Structure

• 1W17 (PDB) (PdaA, corresponds to aa 120 ... 317, 31% identity) PubMed
• P50850 (AlphaFold)

Biological materials

Mutant

• BKE16700 (swsB::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTTCTGTCCCCCCCTCA,  downstream forward: _UP4_TAACAGATGAAGGCAGCTTG
• BKK16700 (swsB::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTTCTGTCCCCCCCTCA,  downstream forward: _UP4_TAACAGATGAAGGCAGCTTG

References

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