ykvN

168

MarR/DUF24 family transcription regulator

Locus: BSU_13760

Molecular weight: 13.43 kDa

Isoelectric point: 6.57

Protein length: 118 aa

Gene length: 357 bp

Function: unknown

Product: MarR/DUF24 family transcription regulator

Essential: no

Synonyms: ykvN

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG1733 (Galperin et al., 2021)

Gene

Coordinates: 1,442,347 → 1,442,703

The protein

Protein family

• MarR/DUF24 family

Domains

• HTH hxlR-type domain (aa 6-104) (according to UniProt)

Structure

• 4A5M (PDB) (HypR, 55% identity) PubMed
• O31679 (AlphaFold)

Paralogous protein(s)

• HxlR, YdzF, YdeP, HypR, YtcD, YodB

Expression and Regulation

Operons

• Genes: ykvN

  Description: PubMed

Biological materials

Mutant

• MGNA-A791 (ykvN::erm), available at the NBRP B. subtilis, Japan
• BKE13760 (ΔykvN::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTCTAAAGCTCTCCATT,  downstream forward: _UP4_TAGGATTGATGTAGCTGCTG
• BKK13760 (ΔykvN::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTCTAAAGCTCTCCATT,  downstream forward: _UP4_TAGGATTGATGTAGCTGCTG

References

Research papers

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