Difference between revisions of "YkoY"

From SubtiWiki
Jump to: navigation, search
Line 52: Line 52:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU13440&redirect=T BSU13440]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
Line 89: Line 90:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU13440&redirect=T BSU13440]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 13:32, 2 April 2014

  • Description: similar to toxic anion resistance protein

Gene name ykoY
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ykoY
MW, pI 35 kDa, 9.731
Gene length, protein length 972 bp, 324 aa
Immediate neighbours ykoX, sigI
Sequences Protein DNA DNA_with_flanks
Genetic context
YkoY context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkoY expression.png















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU13440

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Jeffrey E Barrick, Keith A Corbino, Wade C Winkler, Ali Nahvi, Maumita Mandal, Jennifer Collins, Mark Lee, Adam Roth, Narasimhan Sudarsan, Inbal Jona, J Kenneth Wickiser, Ronald R Breaker
New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control.
Proc Natl Acad Sci U S A: 2004, 101(17);6421-6
[PubMed:15096624] [WorldCat.org] [DOI] (P p)