Difference between revisions of "SpoIISA"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU12830&redirect=T BSU12830]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
Line 98: Line 99:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU12830&redirect=T BSU12830]
  
 
* '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=3O6Q 3O6Q] (cytoplasmic fragment of [[SpoIISA]] (CSpoIISA) in complex with [[SpoIISB]]) {{PubMed|21147767}}
 
* '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=3O6Q 3O6Q] (cytoplasmic fragment of [[SpoIISA]] (CSpoIISA) in complex with [[SpoIISB]]) {{PubMed|21147767}}

Revision as of 13:30, 2 April 2014

  • Description: lethal when synthesized during vegetative growth in the absence of SpoIISB

Gene name spoIISA
Synonyms ykaC
Essential no
Product toxin
Function programmed cell death
Gene expression levels in SubtiExpress: spoIISA
Interactions involving this protein in SubtInteract: SpoIISA
MW, pI 28 kDa, 4.683
Gene length, protein length 744 bp, 248 aa
Immediate neighbours spoIISB, pit
Sequences Protein DNA DNA_with_flanks
Genetic context
SpoIISA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpoIISA expression.png
























Categories containing this gene/protein

sporulation proteins, toxins, antitoxins and immunity against toxins, membrane proteins

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag: BSU12830

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains: three putative membrane-spanning segments and a cytoplasmic domain
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • levels increase at the point of entry into stationary phase of cell cultures grown in sporulation-inducing medium, this is independent of Spo0A PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional Publications: PubMed