xkdT

168

PBSX prophage

Locus: BSU_12730

Molecular weight: 38.21 kDa

Isoelectric point: 4.31

Protein length: 348 aa

Gene length: 1047 bp

Function: unknown

Product: unknown

Essential: no

E.C.: null

Synonyms: xkdT

Genomic Context

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List of homologs in different organisms, belongs to COG3299 (Galperin et al., 2021)

Gene

Coordinates: 1,341,350  1,342,396

The protein

Protein family

• Mu gp47/PBSX xkdT family (with YqbT, according to UniProt)

Structure

• P54339 (AlphaFold)

Expression and Regulation

Operons

• Genes: xtmA-xtmB-xkdE-xkdF-xkdG-xkdH-xkdI-xkdJ-xkdK-xkdM-xkdN-xkzB-xkdO-xkdP-xkdQ-xkdR-xkdS-xkdT-xkdU-xkzA-xkdV-xkdW-xkdX-xepA-xhlA-xhlB-xlyA

  Description: PubMed

  Regulation

  • expression during spore germination is strongly reduced under conditions of osmotic stress PubMed

  Sigma factors

  • Xpf: sigma factor, PubMed, in xpf regulon

Biological materials

Mutant

• BKE12730 (xkdT::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATAATCGCTTCAAAAGTCT,  downstream forward: _UP4_CCTAAGCTTGGGCAGGTGAA
• BKK12730 (xkdT::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATAATCGCTTCAAAAGTCT,  downstream forward: _UP4_CCTAAGCTTGGGCAGGTGAA

References

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