xkdD

168

PBSX prophage

Locus: BSU_12540

Molecular weight: 12.54 kDa

Isoelectric point: 9.68

Protein length: 116 aa

Gene length: 351 bp

Function: unknown

Product: unknown

Essential: no

E.C.: null

Synonyms: xkdD, ykxD

Genomic Context

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List of homologs in different organisms

Gene

Coordinates: 1,323,802 → 1,324,152

Phenotypes of a mutant

• the mutant tends to acquire suppressor mutations that result in improved growth PubMed

The protein

Structure

• P39783 (AlphaFold)

Expression and Regulation

Operons

• Genes: yjzJ-xkdB-xkdC-ykzK-xkdD-xtrA

  Description: PubMed

  Regulatory mechanism

  • Xre: repression, PubMed, in xre regulon

Biological materials

Mutant

• BKE12540 (ΔxkdD::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CACTTCCCGTCGTCCTTATA,  downstream forward: _UP4_CCGAAAAGGGGAGGAAATAA
• BKK12540 (ΔxkdD::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CACTTCCCGTCGTCCTTATA,  downstream forward: _UP4_CCGAAAAGGGGAGGAAATAA

References

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