yfkR

168

part of the YfkQ-YfkR-YfkT germinant receptor of unknown specificity

Locus: BSU_07780

Molecular weight: 42.64 kDa

Isoelectric point: 9.66

Protein length: 384 aa

Gene length: 1155 bp

Function: germination

Product: part of the YfkQ-YfkR-YfkT germinant receptor

Essential: no

Synonyms: yfkR

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG5903 (Galperin et al., 2021)

Gene

Coordinates: 847,498 → 848,652

The protein

Protein family

• GerABKC lipoprotein family (according to UniProt)

Structure

• O35028 (AlphaFold)

Localization

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• Genes: yfkQ-yfkR-yfkS-yfkT

  Description: PubMed

  Regulation

  • expressed during sporulation in the forespore PubMed

  Sigma factors

  • SigG: sigma factor, PubMed, in sigG regulon

Biological materials

Mutant

• MGNA-C258 (yfkR::erm), available at the NBRP B. subtilis, Japan
• BKE07780 (ΔyfkR::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_ACAAATGAGAAGCGGCAAAA,  downstream forward: _UP4_AGCCATTAATGGAGGTGCGT
• BKK07780 (ΔyfkR::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_ACAAATGAGAAGCGGCAAAA,  downstream forward: _UP4_AGCCATTAATGGAGGTGCGT

References

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