ydgJ

168

similar to transcriptional regulator (MarR family)

Locus: BSU_05670

Molecular weight: 18.66 kDa

Isoelectric point: 9.35

Protein length: 164 aa

Gene length: 495 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: ydgJ

Genomic Context

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List of homologs in different organisms, belongs to COG1846 (Galperin et al., 2021)

Gene

Coordinates: 612,836 → 613,330

The protein

Protein family

• MarR family

Domains

• HTH marR-type domain (aa 28-157) (according to UniProt)

Structure

• 3BDD (PDB) (MarR from Streptococcus suis, corresponds to aa 27 ... 134, 37% identity)
• P96708 (AlphaFold)

Expression and Regulation

Operons

• Genes: ydgJ-ydgI

  Description: PubMed

Biological materials

Mutant

• MGNA-C162 (ydgJ::erm), available at the NBRP B. subtilis, Japan
• BKE05670 (ΔydgJ::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAATTAATATACAACGATTG,  downstream forward: _UP4_GAAGCTTAAGAGGAGTGTAT
• BKK05670 (ΔydgJ::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAATTAATATACAACGATTG,  downstream forward: _UP4_GAAGCTTAAGAGGAGTGTAT